Svornostia abyssi: LRS13_05595
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Entry
LRS13_05595 CDS
T09859
Name
(GenBank) hypothetical protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbaj
Svornostia abyssi
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbaj03400
]
LRS13_05595
Enzymes [BR:
pbaj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LRS13_05595
DNA repair and recombination proteins [BR:
pbaj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LRS13_05595
Prokaryotic type
LRS13_05595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
UUY05004
LinkDB
All DBs
Position
complement(1123566..1124798)
Genome browser
AA seq
410 aa
AA seq
DB search
MHATRLPDPRDTDAAAWVAAHLGDLTLEGPGGVVPSPRFRGGQSAADEALAGFNVDGYAR
ARSAVWPPSRRGASGLSPYIRHGLITLPRAWRAVADGPVRDVHRFRDELFWQEYARQVYA
RLGAATRAPLRRTPATAPTRWDEPWPREMACMDVVVGELERDGWAVNQTRMWLASQWTIR
AGHDWRDGDDALFTHLLDGSRAANRLGWQWTVGAGTGRPYGFSRWQVEKRAPAFCERCAL
RDACPIEAWPDADAGPKVAEDPRLRADPDVAATGGPREIERSGGDPEAVWLTAESLGDDD
PALAAHPELPAVFVFDAPLLARLRLSGKRLVFLAETLADLAARRPVELWRGDPVDVLRDR
AVAATFTPVPGWRRRAAEVSPAEVHPWPWLARPRAGTLASFSAWRKTLGR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgccacgcgcctcccggacccgcgcgacaccgacgccgcagcctgggtcgccgcg
cacctcggcgacctgacgctggaaggccccggcggggtcgtgccgtcgccgcgattccgc
ggcgggcaatcggcggccgacgaagcgctcgcgggattcaacgtcgacggctacgcgcgc
gcacggagcgccgtctggccgccgtcacgccgcggcgccagcggcctctccccctacatc
cgccacggcctcatcacactcccgcgcgcgtggcgggcggtcgccgacgggccggtgcgc
gacgtccaccgcttccgcgacgagctgttctggcaggagtacgcgcgccaggtctacgcg
cggctgggcgcggcgacccgggcgccgctgcggcgcacacccgccaccgcgccgacccgg
tgggacgagccgtggccgcgcgagatggcgtgcatggacgtcgtcgtcggcgagctcgag
cgcgacgggtgggcggtgaaccagacgcgtatgtggctggcgtcgcaatggacgatccgc
gcgggccacgactggcgcgacggcgacgacgcgctcttcacccacctgctcgacggctca
cgcgcggccaaccggctggggtggcagtggaccgtcggcgcgggcaccgggcgcccgtac
gggttcagccgctggcaggtcgagaagcgcgcgcccgcgttctgcgagcggtgcgcgctg
cgcgacgcctgcccgatcgaggcgtggcccgacgcggacgccgggccgaaggtcgccgag
gacccgcggttgcgcgccgaccccgacgtcgcggccacgggcgggccgcgcgagatcgag
cgcagcgggggcgaccccgaggccgtctggctcaccgccgaatcgctgggcgacgacgac
ccggcgctcgccgcgcaccccgagctcccggcggtcttcgtcttcgacgcgccgctgctg
gcgcggctgcggttgtcgggcaagcgcctggtgttcctcgccgagacgctcgccgacctg
gccgcgcgccgccccgtcgagctgtggcgcggcgacccggtcgacgtgctgcgcgaccgc
gcggtcgcggccacgttcacgcccgtccccgggtggcgacggcgcgcggcggaggtctca
ccggcggaggtgcatccctggccgtggctggcgcggccgcgggcgggcacgctggcgtcg
ttcagcgcctggcggaagacgctggggcgctga
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