Svornostia abyssi: LRS13_08200
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Entry
LRS13_08200 CDS
T09859
Name
(GenBank) IS3 family transposase
Organism
pbaj
Svornostia abyssi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_21
rve_3
HTH_Tnp_1
rve_2
HTH_28
HTH_23
Ala_racemase_N
rva_4
MerR_1
TSC22
Motif
Other DBs
NCBI-ProteinID:
UUY05486
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Position
join(1654469..1654748,1654748..1655685)
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AA seq
405 aa
AA seq
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MPRKPPYPPEVRERAARMVFEHRAEYSSQWAAITSISQKFGMTAETLRSWVRQVEIDDGK
RPGLTTSEAQRIRDLERENRELRRANEILKAASGFLRAGARPATAEALSVFIDEHRGVFG
VEPICQALGIAPSTYYAVKKREREPSARALRDAELLVEIRRVHAENNNGTYGARKVWKQR
RREGVVVARCTVERLMRNDGLRGVKRGRKRRTTIPDGGADRPSDLVDRDFSADAPNRLWV
ADFTYVMTWSGVVYVAFVIDAFSRRIVGWKADTTMKTSLVLDTLEMALWARDRQGLTVEP
GLIHHTDAGSQYVSFAFTTRLIDAGVDASVGSVGDAYDNSLAETTIGLFKTEKIHREAPW
KTLSDVELATLERVDWFNHTRLHSAIGDMPPAEYEDLHLQRLETQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaagccgccgtatccgccggaggtccgtgagcgggccgcgaggatggtgttc
gagcatcgggctgagtattcgtcgcagtgggcggcgatcacctcgatctcgcagaagttc
gggatgacggccgagacgctgcggtcgtgggtccgccaggtcgagatcgatgacggcaag
cggcccgggctcacgacgagcgaggcgcagcggatccgggacctcgagcgcgagaaccgc
gagctgcgtcgcgcgaacgagatcctcaaggcggcgtcgggctttcttcgcgcgggagct
cgacccgcaaccgccgaagcgctgagcgtgttcatcgacgagcatcgcggcgtcttcgga
gtcgagccgatctgccaggcgctggggatcgctccgtcgacgtactacgcggtcaagaag
cgcgagcgcgagccgtcggctcgcgctctgcgcgacgcagagctgctggtggagatccgg
cgcgtgcacgcagagaacaacaacgggacctatggcgcgcggaaggtctggaagcagcgc
cgtcgcgaaggcgtcgtcgtggcgcgttgcaccgtcgaacgcctcatgagaaatgacggc
ttgcgcggggtcaagcgcggccgcaagcgacggacgacgatccctgacggcggcgccgac
cggccgtccgacctcgtcgatcgcgacttcagcgccgacgctccgaaccggctctgggtc
gcggacttcacctacgtgatgacctggagcggcgtggtctacgtggcgtttgtcatcgac
gcgttctcacgtcggatcgtcggctggaaggccgataccacgatgaagacgagtctcgtg
ctcgacacgctggagatggcgctctgggctcgtgatcggcaaggcctcaccgtcgagccc
gggctcatccatcacaccgatgccgggtcgcaatacgtcagcttcgccttcaccacgcgc
ctcatcgacgccggcgttgacgcgtccgtcggatcggtcggcgacgcctacgacaacagc
ctggccgagaccacgatcggcctcttcaagaccgagaagatccaccgcgaagcgccctgg
aagacactctccgacgtcgagctcgcgaccctggaacgggtcgactggtttaatcacacc
cgacttcactcagccatcggcgacatgcccccggccgagtacgaagacctccacctgcag
aggctggagactcaatag
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