Svornostia abyssi: LRS13_09680
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Entry
LRS13_09680 CDS
T09859
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj03030
DNA replication
pbaj03430
Mismatch repair
pbaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LRS13_09680 (dnaX)
03430 Mismatch repair
LRS13_09680 (dnaX)
03440 Homologous recombination
LRS13_09680 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbaj03032
]
LRS13_09680 (dnaX)
03400 DNA repair and recombination proteins [BR:
pbaj03400
]
LRS13_09680 (dnaX)
Enzymes [BR:
pbaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LRS13_09680 (dnaX)
DNA replication proteins [BR:
pbaj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LRS13_09680 (dnaX)
DNA repair and recombination proteins [BR:
pbaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LRS13_09680 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DnaX_C
AAA
DNAX_ATPase_lid
AAA_30
RuvB_N
PIF1
AAA_22
ResIII
AAA_assoc_2
AAA_5
AAA_14
Mg_chelatase
AAA_16
AAA_19
AAA_7
nSTAND3
DUF815
AAA_18
zf-UBR
Torsin
ORC-CDC6-like
DNA_pol3_delta_C
TsaE
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
UUY05768
LinkDB
All DBs
Position
1987302..1989077
Genome browser
AA seq
591 aa
AA seq
DB search
MPEAPSLYRRHRPRTFSQVVGQEHVVRTLRNAVQQNKVHHAYLFVGSRGTGKTSMAKILA
ACLNCENGPTVDPCGVCQSCIAIQNATSMDVIEMDAASNNSVDDIRDLRDRVSLAPVSGK
SKVYILDEAHMLSSQAWNAFLKTLEEPPPNTIFVLATTEASKVLPTVVDRCHRFDFTRPT
VGQLAQVVGRVAQEEHITIGDDAVALLARHATGSFRDALGTLEQMVTYSGTTITTEDVLA
VLGIADADLLFGMMDAVASGDAAKTLRGCARLVNTGRDPMSFIRDLEAHARDLLVIQTLG
EVPAEMRITTDRDQRIAAQAGRIGRAQVIRLLDLLAEAMRAVRDGADARTFLELALVKAA
APEVDPSTKAIAARLERLERAVNAGAGVSVAPPPITTPEPAPAAPEEPAGRFQRDPEPAP
QPTAAATGAAAAVAAIPHPQVEVEPEPQEPVPAPPPPVPSVGMTLHDLLEVWPAVLDGVR
ERHALCAGLLSTAQPVALDAEMLTIAFPEDQEFLRRKAENPDMRVCLSEAMRAVTGASPQ
ITYELRDFAAAAEAAGTPPPVPETGPEFIEKLMAAFDAEEIRPEDDAPKET
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaggccccttcgctctaccgccgccaccgcccgcggaccttctcgcaggtggtc
ggccaggagcacgtcgtgcgcacgctgcgcaacgccgtgcagcagaacaaggtccatcac
gcgtacctgttcgtcggctcgcgcgggactggcaagacgtcgatggcgaagattctcgcg
gcctgcctgaactgcgagaacggcccgacggtcgacccgtgcggcgtctgccagagctgc
atcgcgatccagaacgcgacgtcgatggacgtcatcgagatggacgcggcctcgaacaac
tcggtcgacgacatccgcgatctgcgcgaccgggtctccctcgcgccagtgtcgggcaag
agcaaggtctacattctcgacgaggcgcacatgctctcgtcccaggcgtggaacgcgttc
ctcaagacgctcgaggagccgccgccgaacacgattttcgtgctcgccaccaccgaggcg
agcaaggtgctgcccacggtcgtcgaccgctgccatcgcttcgacttcacccgccccacg
gtgggccagttggcgcaggtcgtcggccgggtcgcgcaggaggagcacatcacgatcggc
gacgacgccgtcgcgctgctcgcccgccacgccaccgggtcgttccgcgacgcgctcggc
acgctcgagcagatggtcacctactcggggaccacgatcaccacggaggacgtcctcgcg
gtgctcggcatcgccgacgcggacctgctgttcgggatgatggacgccgtcgcgtccggc
gacgccgcaaagacgctgcgcgggtgcgcgcgcctggtgaacaccggccgcgacccgatg
tcgttcatccgcgacctcgaggcccacgcgcgggatctcctggtcatccagacgctcggc
gaggtcccggccgagatgcggatcacgaccgaccgcgaccagcggatcgccgcgcaggcc
ggccgaatcggtcgcgcccaggtgattcgcctgctcgacctcctcgccgaggcgatgcgc
gccgtgcgcgacggcgccgacgcgcggacgttcctcgagctggcgctcgtgaaggccgcg
gcgcctgaggtcgacccgtcgacgaaggcgatcgccgcccggctcgagcgcctggagcga
gcggtgaacgcgggggccggggtgtcggtcgcgccgccaccgatcaccacgcccgagccc
gcaccggccgcccccgaagagcctgcgggccgcttccagcgcgatccggagcccgcgccg
cagcccacagcggccgcgacgggcgcagcggcggcggtcgccgccatccctcaccctcaa
gtcgaggttgagcctgagccccaggagcccgtccccgcgccccctccaccggtgccgtcg
gtcggcatgaccctgcacgacctcctcgaggtctggcccgccgtcctcgacggcgtccgc
gaacgccacgcgctctgcgcgggcctgctctccaccgcccagccggtcgcgctggacgct
gagatgctcacgatcgcgttccccgaggaccaggagttcctgcggcgcaaggccgagaac
ccggacatgcgcgtttgtctcagcgaggcgatgcgcgccgtcacgggcgcctccccgcag
atcacgtacgagctgcgcgacttcgcggcggcggctgaggctgccggtacacccccgccc
gtgcccgagacgggccccgagttcatcgagaagctgatggcggcgttcgacgccgaggag
atccgccccgaagacgacgcccccaaggagacctga
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