Svornostia abyssi: LRS13_11415
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Entry
LRS13_11415 CDS
T09859
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
pbaj
Svornostia abyssi
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbaj01011
]
LRS13_11415
Enzymes [BR:
pbaj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LRS13_11415
Peptidoglycan biosynthesis and degradation proteins [BR:
pbaj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LRS13_11415
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
DUF3530
Motif
Other DBs
NCBI-ProteinID:
UUY06090
LinkDB
All DBs
Position
complement(2335660..2336322)
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AA seq
220 aa
AA seq
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MACPAAAEAQAPAPADSGGAAFGEPLLGAEPAALHGRMTTIKGSRPDAAGKQVTVQRLVP
DAGWQTLGSVPADATGAFALPWRAADVGRYPLRTLVDGQAPAQAQTASSAPDQPELVVYR
PVKATWYGPGFFGNKTACGQRLRKGTRGVAHRTLPCGSVVEVTYGGKTVQATVIDRGPFR
AGVHYDLTQATARDIGFDGLQTIGVLTVSRPAVPVQRKRR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggcctgccccgctgccgcggaagcccaggcgcccgcgcccgccgattccggcggggcg
gccttcggcgagccgctgctcggcgccgagcctgctgcgctccacggccggatgacgacc
atcaagggcagccgtcctgacgccgcgggcaagcaggtcacggtccagcggctcgttccc
gacgccggctggcagaccctcggcagcgtccccgccgacgccaccggcgccttcgccctt
ccctggcgcgcggccgatgtcggccggtatccgctgcgcacgctcgtcgacggccaggcg
cccgcgcaggcccagaccgcgagcagcgcaccggaccagcccgagctcgtcgtctaccgc
ccggtgaaggcgacgtggtacggccccggcttcttcgggaacaagaccgcctgcggccag
cgcctgcgcaagggcactcgcggcgtcgcgcatcgcacgctgccgtgcggctcggtcgtc
gaggtgacctacggcggcaagaccgtccaggccaccgtcatcgatcgcggcccgttccgc
gccggcgtgcattacgacctcacgcaggccaccgcgcgcgacatcggcttcgacggcctg
cagaccatcggcgtcctgacggtctcccgtcccgccgtcccggtccagcgcaagcgccgc
tga
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