Svornostia abyssi: LRS13_11865
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Entry
LRS13_11865 CDS
T09859
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj00260
Glycine, serine and threonine metabolism
pbaj00460
Cyanoamino acid metabolism
pbaj00630
Glyoxylate and dicarboxylate metabolism
pbaj00670
One carbon pool by folate
pbaj00680
Methane metabolism
pbaj01100
Metabolic pathways
pbaj01110
Biosynthesis of secondary metabolites
pbaj01120
Microbial metabolism in diverse environments
pbaj01200
Carbon metabolism
pbaj01230
Biosynthesis of amino acids
pbaj01240
Biosynthesis of cofactors
pbaj04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LRS13_11865
09102 Energy metabolism
00680 Methane metabolism
LRS13_11865
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LRS13_11865
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LRS13_11865
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LRS13_11865
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LRS13_11865
Enzymes [BR:
pbaj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LRS13_11865
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
UUY06171
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Position
2426975..2428264
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AA seq
429 aa
AA seq
DB search
MSDLPSDFFNRPLADVDPEVADAVGAELRRQQGTLEMIASENFVPQSVLECQGSVLTNKY
AEGYPGKRYYGGCEHVDVIEQLAIDRAKALFGAEHANVQPHAGAQANAAVYHALMDPGDT
VLGLSLAHGGHLTHGMKLNFSGKLYDVAAYEVEPDSHLIDMDKVAAIARERRPKMILAGW
SAYPRHLDFARFREIADEVGAYLFVDMAHFAGLVAAGLHPSPVPYADVVTTTIHKTLGGA
RGGMILCKEELAKKMNSAVFPGQQGGPLEHVIAGKAVTLKIAGTDAFKERQQRTLAGAKE
VAAALKTAGHGVDVLTGGTDVHLALVDLRESELTGQDSEDRLHEIGITVNRNAVPFDHRP
PMVTSGLRVGTPALATRGLGVEDFTEIGSIIATALTPEFEARRGELAERVTAIADRYPLY
EHLSVPAPA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatcttccttccgacttcttcaaccgccctctcgctgatgtcgatccggaggtc
gccgacgccgtcggcgccgagttgcgccgccagcagggcacgctggagatgatcgcgtcg
gagaacttcgttccgcagtccgtgctggagtgccagggctcggtcctgacgaacaagtac
gccgagggctacccgggcaagcgctactacggcggctgcgagcacgtcgacgtgatcgag
cagctcgcgatcgaccgcgccaaggcgctgttcggcgccgagcacgcgaacgtccagccg
cacgccggcgcgcaggccaacgccgccgtctaccacgcgctcatggacccgggtgacacg
gtgctcggcctgtcgctcgcccacggcggccatctcacgcacgggatgaagctgaacttc
agcggcaagctctacgacgtcgcggcgtacgaggtcgagcccgactcgcacctcatcgac
atggacaaggtcgcggccatcgcgcgcgagcgccggccgaagatgatcctggccggctgg
tcggcctacccgcgccacctggacttcgcccgcttccgggagatcgccgacgaggtcggc
gcgtacctcttcgtcgacatggcccacttcgccgggcttgtcgcggcaggcctgcatccg
agcccggtgccgtacgccgacgtcgtgacgaccacgatccacaagacgctcggcggcgcg
cgcggcggcatgatcctctgcaaggaggaactggcgaagaagatgaactccgccgtgttc
cccggccagcagggcggtccgctcgagcacgtcatcgcgggcaaggcggtgacgctgaag
atcgccggcaccgacgcgttcaaggaacgccagcagcgcacgctcgcgggtgccaaggag
gtcgccgcggcgctgaagaccgcggggcacggcgtcgacgtgctcaccggtggcaccgac
gtccacctcgcgctggtcgatctgcgcgagtccgagctcacgggccaggactccgaggac
cgcctgcacgagatcgggatcacggtcaaccgcaacgccgtgccgttcgaccatcgcccg
ccgatggtcacgagcggcctgcgcgtcggcacgccggcgctcgccacccgcggcttgggc
gtcgaggacttcaccgagatcggctcgatcatcgccactgcgctcacgcccgagttcgag
gcacggcgcggcgagctggccgagcgggtcacggcgatcgccgaccgctacccgctgtac
gagcacctctcggtgcccgctcccgcctga
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