Svornostia abyssi: LRS13_12695
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Entry
LRS13_12695 CDS
T09859
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj03420
Nucleotide excision repair
pbaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LRS13_12695
03430 Mismatch repair
LRS13_12695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbaj03400
]
LRS13_12695
Enzymes [BR:
pbaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRS13_12695
DNA repair and recombination proteins [BR:
pbaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LRS13_12695
MMR (mismatch excision repair)
Other MMR factors
LRS13_12695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
AAA_30
AAA_16
DUF1450
Motif
Other DBs
NCBI-ProteinID:
UUY01591
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Position
complement(2584757..2586481)
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AA seq
574 aa
AA seq
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MPPADNSSHEAMAAGRTAASNAVLSSESTKRLLVAGPGTGKSFTFQQALKAAGGQGLGLT
FIRNLAGDLASDLSGLADVFTFHGYCKYLMHQHDVAGLQEGDYYPPLFQLLLEDLRVLDG
PDLTVKDVEHRLHQLNTEGGALDAVLERADYYNAVSHTDLVYRVLGHFEAAQESVPAYAL
LVVDEYQDFSRLEANFIALLATKSPTLIAGDDDQALYTTMKHASPSFLRELAADGDFDVF
ELPYCSRCTSVVVAAVNDLLAAATLNGNLQDRIAKQFTCYLPDKEADSTAHPTIIHAECS
TANQPYAGRYIAQQIARIPTADIATARKKGHPAALIIGPRPFLDMAYNEVVTKYPQAALA
KSAPNDVDILDGYRRLAIDAHSRLGWRIILDQCPHEDSAEVLRRALESNSDLDAGLKDDY
KSEHLAISRLVARLLANETLSSEEQAILETATDRSLEQIRLDLDLAQPDRDDAAEVDVAE
PEILFTTLVGSKGLSAEHVFIVGLNDGHFPRDPDAVTDEEICSMLVALSRTRKQCHVIST
KFLGRGFLEPSAFLTAIERHLDKVTINKDYDFDA
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgccgataactccagccatgaagcgatggccgctgggcggactgccgcgtcc
aatgcggtactgagctccgaatccacaaagcggctactcgttgctggacccggaaccggc
aagagcttcacgttccagcaggccctcaaggcggcgggcggtcagggcttggggctgacc
ttcattcgaaacctagctggagatctggcgtcggatctctcgggccttgccgacgtcttc
acgttccacggctactgcaagtacttgatgcatcaacacgatgtcgccggccttcaagag
ggcgactattacccgccgctgtttcagctactccttgaggaccttcgcgttctcgacggg
cccgatctgacagtcaaagacgtcgaacatcgccttcatcagctcaataccgagggaggc
gcgctcgacgcagtcctggagcgcgccgactactacaacgcggtgtcgcatacggacctc
gtgtatcgcgtacttggccactttgaggccgcacaggagtccgttcctgcgtacgccctg
ctcgttgtcgatgagtaccaagacttctctcggctggaagccaacttcatcgcacttcta
gcgacgaagagcccaaccctgattgccggcgacgacgaccaagcgctgtacacgacgatg
aagcacgcctcgccctcgttcttgcgcgagctcgcagctgacggcgacttcgatgtattc
gagctcccctactgctcgcgctgcaccagcgtggtcgtcgccgcggttaacgacctgctg
gccgcagccacactcaacggaaatcttcaagaccggatcgcgaagcagttcacctgctac
ctgcccgacaaagaagctgacagcacagcgcatcccaccatcatccatgccgagtgctca
acggcgaatcagccgtacgccggccgatacatcgcgcagcagatcgcacgaatcccgacg
gcggacattgcgacagcacgcaaaaagggccaccccgcagcactgatcatcggcccgaga
ccatttctcgatatggcttacaacgaggtggtcaccaagtatccccaggcagccttggcg
aagtccgccccgaacgacgtagacattctcgacggatatcgacggcttgccatcgacgct
cactcacgcctgggctggcgaatcatcctcgatcaatgccctcatgaggactccgccgag
gtactcagacgggcgctcgaaagcaacagcgacctcgatgcagggctcaaagacgactac
aaaagcgagcacctggcaatcagccgtcttgtggcccgcctcctcgctaacgagacgctc
agcagcgaagagcaagccatcctcgagactgcgaccgaccggtcgctcgagcagatccgt
cttgaccttgacctcgcgcagccggacagagacgacgccgccgaggtcgacgtggccgaa
ccggagatcctcttcacaaccctcgtgggctccaagggcctatcggcagagcacgtcttc
atcgtggggctcaacgacggtcactttcccagagatccagatgctgtgaccgacgaggag
atctgctcgatgctcgtagccttgagccgcacacgcaagcagtgccacgtgatctcgacc
aagttcttgggccggggctttctggagccgagcgcctttctcacggcgatcgaacggcat
ctcgacaaggtcaccatcaacaaggactacgacttcgacgcctag
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