Svornostia abyssi: LRS13_13625
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Entry
LRS13_13625 CDS
T09859
Name
(GenBank) hypothetical protein
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj00860
Porphyrin metabolism
pbaj01100
Metabolic pathways
pbaj01110
Biosynthesis of secondary metabolites
pbaj01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LRS13_13625
Enzymes [BR:
pbaj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
LRS13_13625
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NirdL-like_HTH
AsnC_trans_reg2
Motif
Other DBs
NCBI-ProteinID:
UUY01763
LinkDB
All DBs
Position
2764609..2765616
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AA seq
335 aa
AA seq
DB search
MIPAASAYDDAVLARLRRGLALAERPFAVLAADVGACEQEVVADVRRLLTSGRFDGLAPV
FPAAAFGLRPTTVAASVPGGAEWRAERILTQHPGVSHVTFRDHTFAVWFSIAIDPASRLG
LAGTLRVLGDELAARAIHPLPARRVIIAGGRPWPVVPTPAKDGRRPFDRAVVLALQAGVP
VDERPFARGAAMLGTSERALVEHLRDMRRRRMLLRVGAVGARSPRAGDRAVLALRDADEA
AADRVVALPAVAAVTHRVGCTGFPYSTHVSLTAPDGAIEDTAAEVERASRAAGSILLRAR
RTVKLRRLLFAPEEHELWEDLHARGLVSTDRSPGG
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgattccggccgcgagcgcgtacgacgacgccgtcctcgcccgcctgcgccgcggcctg
gcgctggccgagcggcccttcgccgtgcttgccgctgacgtcggcgcgtgcgagcaagaa
gtggtcgcggatgtccggcggctgctgacctccggccggtttgacgggttggcaccggtg
ttccccgcggccgccttcggcctgcggcccacgacggtcgcggcgtcggtgcccggcggc
gccgagtggcgggccgagcgcatcctcacccagcatcccggcgtctcgcacgtcacgttc
cgcgaccacacgttcgccgtgtggttctccatcgccatcgacccggcgtcgaggctcggg
ctggccgggacgctgcgggtcctcggtgacgagcttgccgcccgggcgattcacccgctt
cccgcacggcgcgtgatcatcgcgggcggccgtccttggccggtcgtacccacgccggcc
aaggacggccgccgcccgttcgaccgagctgtcgtcctcgccctgcaagccggcgtgccc
gtcgacgagcgtccgtttgcgcggggcgcggcgatgctcgggacgagcgagcgggcgctc
gtcgagcacctgcgcgacatgcgccggcgccggatgctcctcagggtcggcgcggtcggc
gcgcgctcgccgcgcgcgggcgaccgagcggtgctggcgttgcgcgacgccgacgaggcg
gccgcggaccgcgtcgtcgccctcccagcggtggcggcggtcacgcaccgcgtcggatgc
acggggttcccgtactccacgcatgtgtccctaaccgccccggacggcgcgatcgaggac
acggccgccgaggtcgagcgggccagtcgcgccgccgggtcgatcctcctgcgcgcgcgg
cgcaccgtgaagctgcggcgcctgctcttcgcgcccgaggagcacgagctctgggaggac
ctccacgcaaggggtcttgtgtcgacagatcgctcccctggcgggtga
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