Svornostia abyssi: LRS13_13770
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Entry
LRS13_13770 CDS
T09859
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj03420
Nucleotide excision repair
pbaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LRS13_13770
03430 Mismatch repair
LRS13_13770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbaj03400
]
LRS13_13770
Enzymes [BR:
pbaj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LRS13_13770
DNA repair and recombination proteins [BR:
pbaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LRS13_13770
MMR (mismatch excision repair)
Other MMR factors
LRS13_13770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
UUY01792
LinkDB
All DBs
Position
complement(2791167..2792234)
Genome browser
AA seq
355 aa
AA seq
DB search
MNRLTLAVAGGRKTQSIVDACQQRDAHKRVLVLTYTLRNQDELRSRLARQTLASGGIEVM
GWFTFLLNHWVRPYLKLAFPGRRLTGFLYDGDPGHIAGEARFLDREGRAYRRHLSKLSTE
VLSASKGAVLDRLSKIYSAIYVDEVQDLNGFDLVVLEHLMRSPIELHMVGDVRQALLDTN
VADQKYKQYRGPQIKRWFDLQEKAGLLSIEHNEQCWRSNQQIMDLADSVFPTDWGFQATK
SMNTAPVGHDGVFVVRTTHAAAYYDRFEPLCLRHSRSTARDLELPFHNIGEVKGVGTDHV
LIAPTGPSLKFLNGADELTDRSRCSLYVAITRARYSVAFVTDKDVAGLDVWEPAA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggctgacactcgctgtcgctggcggccgcaagacgcagtcgatcgttgacgcc
tgccaacagcgagatgcccacaagcgagttctcgtcctcacgtacacgctccgcaaccag
gacgagctccgttcgcggctcgcgcggcagaccctcgcatccggcggcattgaggtcatg
ggctggttcacgttcctgctcaaccactgggtccgcccctatctcaagctcgccttcccc
ggccgaagactcaccgggttcctctacgacggtgacccaggccatatcgccggcgaggct
cggttcctggaccgcgaggggcgtgcctaccggcgccacctctcgaagctctcgaccgag
gttctgtcggccagcaagggcgccgtcctcgacaggctcagcaagatctactcggcgatc
tacgtcgacgaggtgcaagatctcaacgggtttgacctcgtggtgctcgagcacctgatg
cggtcccccatcgagctccacatggtaggcgacgtccgacaggcgctcctggacaccaac
gtcgccgaccagaagtacaagcagtatcgaggcccgcagatcaagcgctggttcgatcta
caggagaaggccgggctgctctccatcgagcacaacgagcagtgctggcgctccaaccag
cagatcatggacctggccgactcagtgttcccgaccgactggggatttcaggcgaccaag
tcaatgaacacggccccggtcggacacgacggcgtgttcgttgtccggaccacccatgcg
gccgcctattacgaccgcttcgagccgctctgccttcgccatagccgctcgaccgcccgt
gacctcgagctcccgttccacaacatcggcgaggtcaagggggtgggcacagatcacgtt
ctgatagcccccacggggccgagcctgaagttcctcaacggcgcggacgagctgaccgat
cggagtcgctgttcgctctacgtcgcgatcacgcgagccaggtacagcgttgcgttcgtg
acggacaaggacgtcgctgggctcgacgtctgggagccagccgcttga
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