Svornostia abyssi: LRS13_14270
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Entry
LRS13_14270 CDS
T09859
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
pbaj
Svornostia abyssi
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbaj03021
]
LRS13_14270
Transcription machinery [BR:
pbaj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LRS13_14270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
KORA
HTH_3
HTH_24
HTH_Tnp_ISL3
UPF0122
GerE
MarR
Trp_repressor
HTH_Tnp_4
DUF134
HTH_37
HTH_10
HTH_Crp_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UUY01889
LinkDB
All DBs
Position
2875994..2876755
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AA seq
253 aa
AA seq
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MTDRDAQPAARARRERELLERYHEQGDVRAREELVAEMLPLARSLAARYAGRGEPLDDLV
QVASVGLVKAIDGFDLEREVRFSSYATPTVLGELRRHFRDTTWMVRVPRGMQELQLELAR
HRDRLTTELGRAPTVQELAEAVDQPFEEVLATIQSQDARRARSFEEPTGEDLTLGDTLGG
GDPELALAETRAMLGDAADVLSDRDREVLRLRFVEDLTQSQIAEQVGVSQMQISRIIRRS
LERLRERLQGPDG
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccgtgacgcacagcccgcggcgcgcgcgcgccgcgagcgtgagctgctggag
cgataccacgagcagggagacgtccgcgcgcgcgaagagctcgtcgcggagatgcttccc
cttgcccgctcgctggccgcccggtacgccgggcgcggtgagcccctggacgacctcgtc
caggtcgcctccgtcggcctcgtgaaggcgatcgacggcttcgacctcgaacgtgaggtg
cggttctccagctacgccacgcccaccgtgctcggcgagctgcgccgccacttccgcgac
acgacgtggatggtccgcgtgccccgcggcatgcaggagctgcaactcgagctggcccgc
caccgcgaccggctgacgaccgagctgggccgcgcacccaccgtacaggagctggccgag
gccgtcgaccagccgttcgaggaggtgctcgccaccatccagagccaggacgcgcggcgc
gcccgctcgttcgaggaaccgacgggggaggacctcaccctcggggacacgctgggcggc
ggcgacccggaactggcgctggccgagacgcgcgcgatgctcggagacgcagccgacgtg
ctgtcagaccgcgaccgtgaggtcctgcgcctgcggttcgtcgaggacctcacgcagtcg
cagatcgccgagcaggtcggcgtctctcagatgcagatctcgcggatcatccggcgctcc
ctggagcggctgcgtgagcggctccaggggccagacggctga
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