Svornostia abyssi: LRS13_15615
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Entry
LRS13_15615 CDS
T09859
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj02024
Quorum sensing
pbaj03060
Protein export
pbaj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LRS13_15615 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LRS13_15615 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRS13_15615 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbaj02044
]
LRS13_15615 (ffh)
Enzymes [BR:
pbaj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LRS13_15615 (ffh)
Secretion system [BR:
pbaj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LRS13_15615 (ffh)
Eukaryotic Sec-SRP protein
LRS13_15615 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
cobW
Zeta_toxin
CbiA
AAA_16
AAA_30
AAA_17
SRPRB
AAA_24
AAA_33
AAA_19
KTI12
MMR_HSR1
6PF2K
APS_kinase
DnaB_C
ATP_bind_1
NPHP3_N
Viral_helicase1
AAA_18
Thymidylate_kin
NACHT
nSTAND3
ParBc
TsaE
Motif
Other DBs
NCBI-ProteinID:
UUY02140
LinkDB
All DBs
Position
3143577..3144911
Genome browser
AA seq
444 aa
AA seq
DB search
MFDALSEKLQATLSDVRQRGTLTEDDVNAAMREIRLALLEADVNFKVVKSFTASVKERCL
GADVVGALNPGQQVVKIVDEELTALMGGSSAGLAFAPRPPTVILMAGLQGSGKTTATAKL
ARFLKENNDSSVAVAACDVYRPAAVDQLVKVGGQVGATVYEKGTDENPVDIARWALDQAK
QDGKDVLIVDTAGRLHVDESLMEELKEIRKAVKPTSILLVVDAMTGQDAVNVAEQFGEAV
NFDGVIMSKLDGDARGGAALSVKAVTGKPILFASTGEKLDQFERFHPDRMAQRILGMGDV
LSLIEKAESQVEEDEARELEKKLRKGEFTFEDFLSQLKMMRKMGPLSSLLGMIPGFQGSQ
LKNMKVDDRELDRVQAIILSMTPEERRRPELIKGSRRLRIAKGSGTSVQQVNQLVKQFGQ
MQKVMKQLGRGKMPDLQALMRQAR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacgccctctccgagaagctccaggccacgctgagcgacgtccgccagcgcggc
acgctcaccgaggacgacgtcaacgccgcgatgcgcgagatccgtctcgcgctgctcgag
gcggatgtgaacttcaaggtcgtgaagtccttcacggcctcggtgaaggagcgatgcctg
ggcgcggacgtcgtcggcgcgctgaatcccggccagcaggtcgtgaagatcgtcgacgag
gaactcaccgcgctcatgggcggctcctcggccggactggcgttcgcgccgcggccgccc
accgtgatcctcatggccggcctgcagggctcgggcaagacgaccgccacggccaagctc
gcgcggttcctcaaggagaacaacgactcgtcggtcgctgtcgccgcgtgtgacgtctac
cgcccggcggcggtcgaccagctcgtgaaggtcggcggccaggtcggcgcgacggtctac
gagaagggcaccgacgagaacccggtcgacatcgcccgctgggcgctcgaccaggccaag
caggacggcaaggacgttctcatcgtcgacaccgcgggccgcctgcacgtcgacgagtcg
ctcatggaggagctcaaggagatccgcaaggcggtcaagccgacgtcgatcctgttggtg
gtcgacgcgatgaccggtcaggacgcggtgaacgtcgccgagcagttcggcgaggccgtg
aacttcgacggcgtgatcatgagcaagctcgacggcgacgcccgcggcggcgcggcgctg
tcggtcaaggcggtcacgggcaagccgatcctcttcgcgtcgacgggcgagaagctcgac
cagtttgagcgcttccaccccgaccgtatggcccagcggatccttggcatgggcgacgtg
ctgtcgctcatcgagaaggccgagtcgcaggtcgaggaggacgaagcccgcgagctggag
aagaagctgcgcaagggcgagttcaccttcgaggacttcctcagtcagctgaagatgatg
cggaagatggggccgctcagctccctgctgggcatgatcccgggcttccagggctcgcag
ctgaagaacatgaaggtcgacgaccgcgagctcgatcgcgtgcaggcgatcatcctgtcg
atgacgccggaggagcggcggcggcccgagctcatcaagggctcgcggcgcctgcgcatc
gcgaagggttcggggacctccgtgcagcaggtcaaccagctcgtcaagcagttcggccag
atgcagaaggtcatgaagcagctcgggcggggcaagatgcccgatctccaggccctcatg
cggcaagcgcggtga
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