Svornostia abyssi: LRS13_15740
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Entry
LRS13_15740 CDS
T09859
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
pbaj
Svornostia abyssi
Pathway
pbaj02020
Two-component system
pbaj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LRS13_15740 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LRS13_15740 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbaj03021
]
LRS13_15740 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pbaj02035
]
LRS13_15740 (whiG)
Transcription machinery [BR:
pbaj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LRS13_15740 (whiG)
Bacterial motility proteins [BR:
pbaj02035
]
Flagellar system
Flagellar assembly proteins
Stator
LRS13_15740 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_23
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
UUY02162
UniProt:
A0ABY5PC18
LinkDB
All DBs
Position
3161661..3162455
Genome browser
AA seq
264 aa
AA seq
DB search
MGEGSTLETNVKAIELKDLWRRYKATGDEKARERLVVAYSPLVKYVSGRMASGLPAHVEE
ADLISYGLVGLISAIERFDLEREIKFETYAITRIKGAIIDELRSLDWVPRSVRARAREIE
RANSKLEHELQRAPTDEEMAAELGSTVEEFQESLLQISNSSVAALDELWTVSDSSGDQVS
LLDTLQDPGAPDPAHVMDITDLKDRVADAIARLPEREKLVVALYYYENLTLREIGEVLGV
TESRISQLHTKAVLRLRSRLQGED
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgggggagggaagcaccctggaaacaaacgtcaaggcgatcgaactgaaagatctctgg
cggcggtacaaagccaccggagatgaaaaagcccgcgaacggcttgtcgtcgcctattca
cccctggtcaagtacgtctcgggacgtatggcgtccggcctgcccgcacacgtcgaggag
gccgacctcatctcgtacggcctcgtcggcttgatcagcgcgatcgagcggttcgacctc
gagcgcgagatcaagttcgagacgtacgccatcacgcgcatcaagggcgcgatcatcgac
gagctgcgctcgctcgactgggtgccgcgctccgtgcgcgctcgcgcccgcgagatcgag
cgggcgaactcgaagctcgagcacgaactccagcgcgcgccgacggatgaggagatggcc
gccgagctgggctcgacggtcgaggagttccaggagtcgctgctgcagatctccaactcg
tcggtcgcggcgctcgacgagctgtggacggtcagtgactcgtccggcgatcaggtgtcc
ctgctggacacgctccaggacccgggcgccccggatccggcgcacgtcatggacatcacc
gacctgaaggaccgggtcgctgatgccatcgcccggttgcccgagcgtgagaagctcgtg
gtcgccctctactactacgagaacctcacgctccgcgagatcggcgaggtcctcggcgtg
accgagtcgcggatcagccagctgcacacgaaggccgtgctgcgcctgcggtcgcggctg
cagggcgaggactga
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