Svornostia abyssi: LRS13_16215
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Entry
LRS13_16215 CDS
T09859
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRS13_16215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbaj03400
]
LRS13_16215
Enzymes [BR:
pbaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LRS13_16215
DNA repair and recombination proteins [BR:
pbaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LRS13_16215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UUY02252
LinkDB
All DBs
Position
complement(3250515..3251381)
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AA seq
288 aa
AA seq
DB search
MLIGAHVSPAGGPANAVTRGEERGATAIQIFNQNPRAWKPTFYSDEQIEAYHEAMIGSPV
KALLIHAVYLLNAASDDPEIREKTLTSLAASLQAGDRLGAHAVVLHPGSAKTGEVGPAIA
RAGEVIAEALALSETCALHLENTAGAGGTLGRSFDELAQLIEAAGGNTRLGVCLDSCHLF
ASGYDIRTIDGLTETIDECEAKVGAGRLGSLHLNDSQTPLGSNRDRHANVGSGELGEDGC
AAFLSEPRFESLPVVLETPGENRSGPTAEELAFCHELRARGLAARAAA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcggcgcacatgtctcccccgccggcggccccgccaacgccgtcacacgcggt
gaagagcggggcgccaccgccatccagatcttcaaccagaacccgcgggcgtggaagccg
acgttctactccgacgagcagatcgaggcgtaccacgaggcgatgatcggctcgccggtg
aaggcgctgctcatccacgcggtgtacctgctcaacgcggcctccgacgaccccgagatc
cgcgagaagacgctgacctcgctcgcggcctcgctgcaggccggtgaccggctcggtgcc
cacgccgtcgtgctgcatcccggttcggccaagaccggcgaggtcggcccggcgatcgcc
cgggccggcgaggtcatcgccgaggcgctcgcgctgtcggagacctgcgcactgcacctg
gagaacaccgcgggcgcgggcggcaccctcgggcggtcgttcgacgagctcgcgcagctg
atcgaggcggccggtggcaacacccgccttggcgtgtgcctggacagctgccatctcttc
gcgtcgggctacgacatcaggacgatcgacgggctcaccgagacgatcgacgagtgtgaa
gccaaggtcggcgcggggcggctcgggtcgctgcacctcaacgattcccagacgccgttg
ggctcgaaccgtgaccggcacgcgaacgtcggctccggcgaactgggcgaggacggctgc
gcggcgttcctgtccgagccgcgcttcgagtcgctgccggtcgtgctggagacgccgggc
gagaaccggtcgggccccacggccgaggagctcgcgttctgccacgagctgcgcgcccgt
ggcctggccgcacgcgcggcagcgtaa
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