Svornostia abyssi: LRS13_16940
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Entry
LRS13_16940 CDS
T09859
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pbaj
Svornostia abyssi
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbaj03032
]
LRS13_16940
03036 Chromosome and associated proteins [BR:
pbaj03036
]
LRS13_16940
03400 DNA repair and recombination proteins [BR:
pbaj03400
]
LRS13_16940
DNA replication proteins [BR:
pbaj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LRS13_16940
Chromosome and associated proteins [BR:
pbaj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LRS13_16940
DNA repair and recombination proteins [BR:
pbaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LRS13_16940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Nup214_FG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF4777
Motif
Other DBs
NCBI-ProteinID:
UUY02378
LinkDB
All DBs
Position
complement(3381265..3381543)
Genome browser
AA seq
92 aa
AA seq
DB search
MSLTKQELAQKVAGDTGLSQAQAKEAIEATFESITKELAGGGEVAVSGFGKFSVSKRAAR
EGRNPATGETIKIAASNAAKFSAAAGLKKALN
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgacgaagcaggagcttgcccagaaggtggccggagataccggtctgtcccag
gcgcaggcgaaggaggccatcgaggccacctttgagtcgatcaccaaggaactcgccggt
ggcggcgaggtcgcggtgtccggattcgggaagttcagcgtcagcaagcgtgccgcccgc
gagggtcgcaacccggcgacgggcgagaccatcaagatcgccgcgagcaacgccgcgaag
ttctcggcggccgctggcctcaagaaggccctgaactag
DBGET
integrated database retrieval system
