KEGG   Svornostia abyssi: LRS13_17340
Entry
LRS13_17340       CDS       T09859                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
pbaj  Svornostia abyssi
Pathway
pbaj00300  Lysine biosynthesis
pbaj00470  D-Amino acid metabolism
pbaj01100  Metabolic pathways
pbaj01110  Biosynthesis of secondary metabolites
pbaj01120  Microbial metabolism in diverse environments
pbaj01230  Biosynthesis of amino acids
Module
pbaj_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
pbaj_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pbaj00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LRS13_17340 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LRS13_17340 (dapF)
Enzymes [BR:pbaj01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     LRS13_17340 (dapF)
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: UUY02455
LinkDB
Position
complement(3454417..3455274)
AA seq 285 aa
MTLIFEKWQALGNDYLIVERDRLPFALTSARVRRLCDRHLGLGGDGILELAPADEPGFVA
RLRIFNPDGSEAELSGNGAREAILYLRRRGWTTSDQFSIQTVAGELRPTILSETTCTVDM
GRAKLSSADYPAGGPDGAGALEAGSQTWRFQHVSIGNPQCAIEVPDLDTLAALDLPAIGS
DIEHHPLFPNRTNVSWWTRTGAGEIRARIFERGVGETMSSGTGATGAAVASVLRGGDSPV
TVHLDGGELTVDVQEDLHVDLAGWAVPVYAGEVSSDLLNELAALD
NT seq 858 nt   +upstreamnt  +downstreamnt
atgacgctgatcttcgagaagtggcaggcgctcggcaacgactacctcatcgtcgaacgc
gaccggctgccgttcgcgctgacgtccgcccgcgtgcggcgcctctgcgatcgtcacctc
ggcctgggcggcgacggcatcctcgaactcgcgcctgcggacgagcccggcttcgtcgcc
cgcctgcggatcttcaatccggacggctcggaggccgagctgtccggcaacggcgcgcgg
gaggcgatcctctacctgcgtcgccgcggctggacaacgtccgaccagttctcgatccag
accgtcgccggcgaactgcggcccacgatcctctcggagacgacgtgcaccgtggacatg
ggccgcgcgaagctctcctcggcggactatccggcgggcggccccgacggcgcgggcgcg
ctggaagccggctcgcagacgtggcgcttccagcacgtctcgatcggcaacccgcagtgc
gccatcgaggtccctgacctcgacacactcgcggcgctcgacctccctgccatcgggtcg
gacatcgagcaccacccgctgttccccaaccggacgaacgtctcgtggtggacacgcaca
ggcgccggcgagatccgcgcgcgcatcttcgaacgcggcgtgggggagacgatgtcgtcg
ggcaccggtgcgaccggggccgcagtcgcctcggtcctgcgcggcggcgacagccccgtc
acggtccacctcgacggcggcgagctgacggtcgacgtgcaggaggacctccacgtcgac
ctcgcagggtgggcggtgcccgtgtacgcgggtgaggtcagcagcgacctgctgaacgag
ctcgccgccctggactga

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