Entry |
|
Symbol |
dapF
|
Name |
(GenBank) diaminopimelate epimerase
|
KO |
|
Organism |
|
Pathway |
pbaj01110 | Biosynthesis of secondary metabolites |
pbaj01120 | Microbial metabolism in diverse environments |
|
Module |
pbaj_M00016 | Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine |
pbaj_M00527 | Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine |
|
Brite |
KEGG Orthology (KO) [BR:pbaj00001]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LRS13_17340 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LRS13_17340 (dapF)
Enzymes [BR:pbaj01000]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
LRS13_17340 (dapF)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(3454417..3455274)
|
AA seq |
285 aa
MTLIFEKWQALGNDYLIVERDRLPFALTSARVRRLCDRHLGLGGDGILELAPADEPGFVA
RLRIFNPDGSEAELSGNGAREAILYLRRRGWTTSDQFSIQTVAGELRPTILSETTCTVDM
GRAKLSSADYPAGGPDGAGALEAGSQTWRFQHVSIGNPQCAIEVPDLDTLAALDLPAIGS
DIEHHPLFPNRTNVSWWTRTGAGEIRARIFERGVGETMSSGTGATGAAVASVLRGGDSPV
TVHLDGGELTVDVQEDLHVDLAGWAVPVYAGEVSSDLLNELAALD |
NT seq |
858 nt +upstreamnt +downstreamnt
atgacgctgatcttcgagaagtggcaggcgctcggcaacgactacctcatcgtcgaacgc
gaccggctgccgttcgcgctgacgtccgcccgcgtgcggcgcctctgcgatcgtcacctc
ggcctgggcggcgacggcatcctcgaactcgcgcctgcggacgagcccggcttcgtcgcc
cgcctgcggatcttcaatccggacggctcggaggccgagctgtccggcaacggcgcgcgg
gaggcgatcctctacctgcgtcgccgcggctggacaacgtccgaccagttctcgatccag
accgtcgccggcgaactgcggcccacgatcctctcggagacgacgtgcaccgtggacatg
ggccgcgcgaagctctcctcggcggactatccggcgggcggccccgacggcgcgggcgcg
ctggaagccggctcgcagacgtggcgcttccagcacgtctcgatcggcaacccgcagtgc
gccatcgaggtccctgacctcgacacactcgcggcgctcgacctccctgccatcgggtcg
gacatcgagcaccacccgctgttccccaaccggacgaacgtctcgtggtggacacgcaca
ggcgccggcgagatccgcgcgcgcatcttcgaacgcggcgtgggggagacgatgtcgtcg
ggcaccggtgcgaccggggccgcagtcgcctcggtcctgcgcggcggcgacagccccgtc
acggtccacctcgacggcggcgagctgacggtcgacgtgcaggaggacctccacgtcgac
ctcgcagggtgggcggtgcccgtgtacgcgggtgaggtcagcagcgacctgctgaacgag
ctcgccgccctggactga |