Svornostia abyssi: LRS13_17380
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Entry
LRS13_17380 CDS
T09859
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pbaj
Svornostia abyssi
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbaj03016
]
LRS13_17380 (miaB)
Enzymes [BR:
pbaj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LRS13_17380 (miaB)
Transfer RNA biogenesis [BR:
pbaj03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LRS13_17380 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
UUY02463
LinkDB
All DBs
Position
complement(3460987..3462327)
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AA seq
446 aa
AA seq
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MRKRYHVTTFGCQMNEHDSERMKGMLETLGYDEAPARDEADLILFNTCSIRESADSKFVA
HLGEAKRLKSEDPSRVVGVGGCWAQSVKDEVFARFPFVDVAFGPGQVHKLAEFLTSDAIT
AQGYFEFEGFPGHLPTKREREFQAWVQIQVGCNCRCSYCIVPSTRGREASRPFNELIAEV
QGLVADGVREVTLLGQTVNSYGRDLRGDDGRPRSFSELLRALDALDGLDRIRYTSPHPKD
LREEVAICHAELPSVCQHIHLPLQSGSSRILKAMRRTYTRERYLDRVAMIRKHVPDVALT
TDVIVGFPGETEEDFEETLSLCEEVGYDAAFTFIFSPRRGTEAAEITEGLIPHPVKVERL
ERLVEVIQRGAHERSQRFVGRTLDVLVEGPSRNDPSRLRGRSSHNKVVNFSGLAQPGEIV
PVEIVSATSQTLAGEMSLVARLAGST
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagcgctaccacgtcaccaccttcgggtgccagatgaacgagcacgactccgag
cggatgaagggcatgctcgagacgctcggctacgacgaggcgcccgcgcgcgacgaggcc
gatctcatcctcttcaacacctgctcgatccgggaatcggcggactcgaagttcgtcgcg
cacctgggggaggccaagcggctgaagtccgaagaccccagccgggtcgtcggggtcggg
ggctgctgggcgcagtcggtgaaggacgaggtctttgcgcggttcccgttcgtggatgtc
gccttcgggcccggccaggtgcacaagctcgccgagttcctgacgtccgacgcgatcacc
gcgcagggctacttcgagttcgagggctttcccgggcaccttccgaccaagcgcgagcgc
gagttccaggcctgggtgcagatccaggtggggtgcaactgccgctgctcgtactgcatc
gtcccctccacgcggggccgtgaggccagccgcccgttcaacgagctgatcgccgaggtc
cagggcctcgtcgcggacggcgtgcgcgaggtgacgctcctcgggcagacggtcaacagc
tacggccgcgacctgcgcggtgacgacggccggccgcggagcttcagcgagctgctccgt
gccctcgatgccctcgacggcctcgaccgcatccgctacacgagcccgcatccgaaggat
ctgcgcgaggaggtggccatctgccacgccgagctgccgtcggtctgccagcacatccat
ctgccgctgcagagcggatccagccggatcctcaaggcgatgcgccggacctacacgcgc
gagcgctacctcgaccgggtggcgatgatccgcaagcatgtcccggacgtcgcgctgacg
accgatgtcatcgtcgggttcccgggggagaccgaggaggacttcgaggagaccctctcg
ctctgcgaggaggtcggttacgacgcggcgttcacgttcatcttctcgccgcgccgcggc
accgaggccgcagagatcaccgagggcctcatcccgcacccggtgaaggtcgagcggctg
gaacgcctcgtcgaggtcatccagcggggcgcgcatgagcggtcgcagcgcttcgtcggg
cggacgctcgacgttctcgtggaagggccgtcgcgcaacgatccgtcgcgactgcgcggg
cggtcgtcgcacaacaaggtcgtgaacttcagcgggctggcacagccgggggagatcgtc
cccgtcgagatcgtctcggcgacgagccagaccctcgcgggtgagatgtcgctcgtcgcg
cgtctcgccggcagcacctga
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