KEGG   Svornostia abyssi: LRS13_17395
Entry
LRS13_17395       CDS       T09859                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
pbaj  Svornostia abyssi
Pathway
pbaj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbaj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LRS13_17395 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbaj03019]
    LRS13_17395 (rny)
Messenger RNA biogenesis [BR:pbaj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LRS13_17395 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B DUF3450 KH_2 HTH_17 Phage_phiJL001_Gp84_N ATG14 Fez1
Other DBs
NCBI-ProteinID: UUY02466
UniProt: A0ABY5PD06
LinkDB
Position
complement(3463809..3465233)
AA seq 474 aa
MEIVGAAAILAVALIVVAVLVARGRRSHAPVAANSDALRDVEQAVREREQRIGEVEERSR
ERAAELDRRARELDEQTRALEAEREQLARRRREHEEALEQISGLSVSQARDRLVREAEDQ
ARHDAAKRLRSIEEETKRAADQRVRSILSVAMQRLAASHAVETTVSVVELPSDDMKGRII
GREGRNIRALENLTGVDFIIDDTPNAVVLSAFDGVRREIARMTLERLLQDGRIHPAKIEE
TYFQAKSDLDKHIAEAGEEAALAANVQGLDPELVKTLGRLKFRTSYGQNVLAHSVECANL
AALMADELGASARTARRAALLHDIGKAVSHEVEGPHALVGGDMARRHGESESVAHAMEAH
HNEVEPQTVEAVIVQTADALSGARPGARGESLEHYVKRLRELEQLAQKHEGVDKVYAMQA
GREIRVIVAPDAVDDDRALALAREIAREIEQDMEYPGQIKVTVIRESRAVEYAR
NT seq 1425 nt   +upstreamnt  +downstreamnt
atggagatcgtaggcgcggcggccatcctcgcggtggcgctcatcgtcgtcgccgtgctc
gtcgcacgggggcggcgttcgcatgcgccggtcgccgcgaactcggatgccctgcgggac
gtcgaacaggcggtgcgcgagcgcgagcagcgcatcggcgaggtcgaggagcgcagccgc
gaacgggccgcggagctcgaccggcgggcccgcgagctcgatgagcagacacgcgcgctg
gaggccgagcgcgaacagctcgctcggcgccgccgcgagcacgaggaggcgctggagcag
atctccgggctgagcgtctcccaggcgcgcgaccggctggtgcgcgaggcagaagatcag
gctcgccacgacgcagcgaagcggctgcggtccatcgaggaggagaccaagcgcgccgcc
gaccagcgcgtgcgctccatcctgtcggtcgcgatgcagcgcctggccgcaagccatgcc
gtcgagaccaccgtgtccgtcgtcgagctgccgagtgacgacatgaagggccggatcatc
ggtcgtgaggggcgcaacatccgcgcactcgagaacctcacgggcgtcgacttcatcatc
gacgacacaccgaacgcggtggtgctgtccgccttcgacggcgtccgtcgcgagatcgcc
cggatgacgctcgagcggctcctccaggacggccgcatccatccggccaagatcgaggag
acgtacttccaggcgaagtccgatctcgacaagcacatcgccgaggccggggaggaggcc
gcgctggcggcgaacgtccagggcctggacccggagctggtcaagaccctcggtcggctg
aaattccgtacgagctacggccagaacgtgctcgcgcactccgtcgagtgcgcgaacctc
gcggcgctcatggccgacgagctgggcgccagcgcgcgcaccgcgcgccgcgccgcgctc
ctgcacgacatcggcaaggccgtatcgcacgaggtcgagggcccgcacgccctcgtcggc
ggcgacatggcgcgccgccacggcgagtccgagtcggtcgcgcacgcgatggaggcccac
cacaacgaggtcgagccgcagacggtcgaggccgtcatcgtgcagaccgccgacgcgctg
agcggcgcgcggcccggcgcgcgcggcgagtcgctcgagcactacgtcaagcgcctgcgc
gagctcgagcaactcgcgcagaagcacgagggcgtcgacaaggtctacgcgatgcaagcg
ggccgcgagatccgtgtgatcgtcgcgccagacgccgtcgacgacgaccgagccctcgcc
ctggcccgcgagatcgcccgggagatcgagcaggacatggagtaccccgggcagatcaag
gtcaccgtcatccgggagtcacgcgcggtcgagtacgcgcgctga

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