Svornostia abyssi: LRS13_17395
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Entry
LRS13_17395 CDS
T09859
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LRS13_17395 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbaj03019
]
LRS13_17395 (rny)
Messenger RNA biogenesis [BR:
pbaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LRS13_17395 (rny)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
DUF3450
KH_2
HTH_17
Phage_phiJL001_Gp84_N
ATG14
Fez1
Motif
Other DBs
NCBI-ProteinID:
UUY02466
UniProt:
A0ABY5PD06
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Position
complement(3463809..3465233)
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AA seq
474 aa
AA seq
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MEIVGAAAILAVALIVVAVLVARGRRSHAPVAANSDALRDVEQAVREREQRIGEVEERSR
ERAAELDRRARELDEQTRALEAEREQLARRRREHEEALEQISGLSVSQARDRLVREAEDQ
ARHDAAKRLRSIEEETKRAADQRVRSILSVAMQRLAASHAVETTVSVVELPSDDMKGRII
GREGRNIRALENLTGVDFIIDDTPNAVVLSAFDGVRREIARMTLERLLQDGRIHPAKIEE
TYFQAKSDLDKHIAEAGEEAALAANVQGLDPELVKTLGRLKFRTSYGQNVLAHSVECANL
AALMADELGASARTARRAALLHDIGKAVSHEVEGPHALVGGDMARRHGESESVAHAMEAH
HNEVEPQTVEAVIVQTADALSGARPGARGESLEHYVKRLRELEQLAQKHEGVDKVYAMQA
GREIRVIVAPDAVDDDRALALAREIAREIEQDMEYPGQIKVTVIRESRAVEYAR
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgtaggcgcggcggccatcctcgcggtggcgctcatcgtcgtcgccgtgctc
gtcgcacgggggcggcgttcgcatgcgccggtcgccgcgaactcggatgccctgcgggac
gtcgaacaggcggtgcgcgagcgcgagcagcgcatcggcgaggtcgaggagcgcagccgc
gaacgggccgcggagctcgaccggcgggcccgcgagctcgatgagcagacacgcgcgctg
gaggccgagcgcgaacagctcgctcggcgccgccgcgagcacgaggaggcgctggagcag
atctccgggctgagcgtctcccaggcgcgcgaccggctggtgcgcgaggcagaagatcag
gctcgccacgacgcagcgaagcggctgcggtccatcgaggaggagaccaagcgcgccgcc
gaccagcgcgtgcgctccatcctgtcggtcgcgatgcagcgcctggccgcaagccatgcc
gtcgagaccaccgtgtccgtcgtcgagctgccgagtgacgacatgaagggccggatcatc
ggtcgtgaggggcgcaacatccgcgcactcgagaacctcacgggcgtcgacttcatcatc
gacgacacaccgaacgcggtggtgctgtccgccttcgacggcgtccgtcgcgagatcgcc
cggatgacgctcgagcggctcctccaggacggccgcatccatccggccaagatcgaggag
acgtacttccaggcgaagtccgatctcgacaagcacatcgccgaggccggggaggaggcc
gcgctggcggcgaacgtccagggcctggacccggagctggtcaagaccctcggtcggctg
aaattccgtacgagctacggccagaacgtgctcgcgcactccgtcgagtgcgcgaacctc
gcggcgctcatggccgacgagctgggcgccagcgcgcgcaccgcgcgccgcgccgcgctc
ctgcacgacatcggcaaggccgtatcgcacgaggtcgagggcccgcacgccctcgtcggc
ggcgacatggcgcgccgccacggcgagtccgagtcggtcgcgcacgcgatggaggcccac
cacaacgaggtcgagccgcagacggtcgaggccgtcatcgtgcagaccgccgacgcgctg
agcggcgcgcggcccggcgcgcgcggcgagtcgctcgagcactacgtcaagcgcctgcgc
gagctcgagcaactcgcgcagaagcacgagggcgtcgacaaggtctacgcgatgcaagcg
ggccgcgagatccgtgtgatcgtcgcgccagacgccgtcgacgacgaccgagccctcgcc
ctggcccgcgagatcgcccgggagatcgagcaggacatggagtaccccgggcagatcaag
gtcaccgtcatccgggagtcacgcgcggtcgagtacgcgcgctga
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