Svornostia abyssi: LRS13_17415
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Entry
LRS13_17415 CDS
T09859
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pbaj
Svornostia abyssi
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbaj03016
]
LRS13_17415 (thpR)
Enzymes [BR:
pbaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
LRS13_17415 (thpR)
Transfer RNA biogenesis [BR:
pbaj03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
LRS13_17415 (thpR)
BRITE hierarchy
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Paralog
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UUY02470
UniProt:
A0ABY5PD87
LinkDB
All DBs
Position
complement(3467887..3468444)
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AA seq
185 aa
AA seq
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MTDTARLFVAVDLPDGVRAMLAAWARRYVGDRDDLRIVPAEALHLTLAFLGDRPVACIDE
LGTALSECAEGPVPLGVGAPLWLAPRRPHVLTVAVQDPAGALAALHRAVEAALTDTVGYV
PDARAFRPHVTVARVRRGARVRPWELPAPDAARFRAVAVGLYRSRLGAGGAQYEVLARVA
LPRPG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacacggcgcggctgttcgtcgccgtggacctgcccgacggggtccgcgcgatg
ctcgcggcctgggcccgcaggtatgtcggggaccgcgacgatctccggatcgtgcccgcg
gaggcgctgcacctgacgctggcgttcctgggtgaccggccggtggcatgcatcgacgag
ctcggcacggcgctctcggagtgcgcagagggcccggtgccgctgggtgtcggggctccg
ctgtggctggcgccccggcggccgcatgtgctgacggtcgcagtgcaggacccggcgggc
gccctggcggcgttgcatcgggccgtggaggcggcgttgaccgacacggtcgggtacgtc
cccgacgcccgtgcctttcggccgcacgtcacggtcgcccgggtgcgccgcggcgcacgg
gtgcggccctgggagctgccggctcccgacgccgcacggttccgcgcggtcgcggtcggc
ttgtaccgcagccggctcggggcaggtggggcgcagtacgaggtgctggccagggtcgcc
ctcccacgacccggatga
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