Svornostia abyssi: LRS13_17540
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Entry
LRS13_17540 CDS
T09859
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbaj
Svornostia abyssi
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbaj03016
]
LRS13_17540 (truB)
Enzymes [BR:
pbaj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LRS13_17540 (truB)
Transfer RNA biogenesis [BR:
pbaj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LRS13_17540 (truB)
Prokaryotic type
LRS13_17540 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
UUY02493
UniProt:
A0ABY5PCY2
LinkDB
All DBs
Position
complement(3489486..3490277)
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AA seq
263 aa
AA seq
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MDGVLLIDKPAGKTSHDVVAMVRRAHRGVKVGHAGTLDPFATGLLLVLLGRATRIQRYLM
ALPKEYETVAQLGATSTTGDPEGEITHTGRVPPDPPELPTGEVRQRPPAYSAIKIGGERA
YKKARRGEEVDVPERVVHVSRFEQRWREGDRAAFVIACSSGTYVRSLIADLHDGYCLELR
RTRIGPFDVADADPERLIGLQEALAFLPHVALEGERAKAAGHGVGVECDADGDGPFLLTD
ADGAIAIAERQGDLLKPVVGFRA
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtggacggcgtcctgctcatcgacaagccggctgggaagacgtcgcacgatgtcgtggcg
atggtgcgccgcgcccatcgtggcgtgaaggtcgggcacgcgggcacgctcgacccgttc
gccaccgggctgctcctcgtcctgctggggcgcgcgacgcgcatccagcgctacctcatg
gcgcttccgaaggagtacgagacggtcgcccagctcggcgcgacgtccacgaccggcgat
cccgagggggagatcacgcacacgggccgcgtcccgcccgatccgccggagctcccgacc
ggcgaggtgcgccagcggccgccggcctactcggcgatcaagatcggcggcgagcgggcg
tacaagaaggcccggcgcggggaggaggtcgacgtgcccgagcgggtcgtgcacgtcagc
cgcttcgagcagcggtggcgcgagggtgatcgggccgcgttcgtcatcgcgtgctcgtcg
gggacctacgtccggtcgctcatcgccgacctgcacgacggctactgcttggagctgcgc
cgcacgcggatcgggccgttcgacgtcgccgacgccgacccggagcggctgatcggcctg
caggaggcgctcgcgttcctcccgcacgtggcgctggagggcgagcgggccaaggccgcg
gggcacggcgtgggggtggagtgcgacgcggacggggatgggccgttcctgctcaccgac
gctgacggcgcgatcgcgatcgccgagcgacaaggcgacctgctcaaacccgtcgtaggc
ttccgcgcatga
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integrated database retrieval system
