Svornostia abyssi: LRS13_17870
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Entry
LRS13_17870 CDS
T09859
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
pbaj
Svornostia abyssi
Pathway
pbaj02024
Quorum sensing
pbaj03060
Protein export
pbaj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LRS13_17870 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LRS13_17870 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRS13_17870 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbaj02044
]
LRS13_17870 (secD)
Secretion system [BR:
pbaj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LRS13_17870 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
ACR_tran
DUF6133
Motif
Other DBs
NCBI-ProteinID:
UUY02547
LinkDB
All DBs
Position
complement(3556065..3558971)
Genome browser
AA seq
968 aa
AA seq
DB search
MTDRRRNIFILLFVAGLVIASIAVIATKQTRLGLDLQGGVELVYEASPTPQQPVVDQAAL
DRAIDVMRERVDRLGVAEPEIQRSGENQISVALPDVQDADKAQRQVGQVAQLFFYDWETN
VIGPDGEVAPDDPEVTGGPSAGRVGGISYYDAVVRASEQPAAEGEAAKNVSHDGLYFLLD
QKKERVVGGPEEEKQDLFSERPDDAEAPDCKEGGESTLCVETVQPGTTIVRAEQADDQAE
IKDPNNAQYYVLRDRVALKGTDIKNPEQQFDQGAGGSGQPIVTFDFTDSGRKTWEEVTRG
IAQRGLESFAPGSDPQSAAQHFAIVLDNELVSVPFIDFQQNPDGIDGRNGSQIEGGFTIE
SAQELANLLKTGALPVKLDLISQSQISASLGQQALDQSLIAAAAGMFVVALFLLIFYRVL
GVIAVGALGIYALLLFALIKMIPIVMTLPGIAGLVLTIGVAADANIVIFERVKEEIRAGR
SVQAGIAAGYRKGLTAIIDANVVTVMVAFILFVLATAGVKGFAFTLGVGTIVSFLTAVVF
TQAILGTMGRSRLLARPSALGAGKPARDITFDFMGASRWFFSGSGVILAIGALAIGANGI
NFGIDFESGTRIKTAVEKTTNEDGIRAVMSSVGYGDAKIQRVQEPELGENVFQISTPSLE
PADVQEVRAALDEEFGVGDEFSNSSIGPTFGETVARTAVIAIIASFLVIAAYIAIRFEWK
YAVPLLIAVMHDLLITAGIYALFGFEVTSATVAALLTILGFSLYDTIIVFDRVRENVPRM
PRAAFSQIVNRSMSEVIVRSLATSFCTLLPVLALFAFGGETLRSFAVALIVGTISGTYSS
VFIASPVLTHWKERERVWRRRRGIIESELGSVPAYATAVGGGPVDVAPTERKRPSRRLTS
PDDPQAVSKEEFDAMVQDLHVDAPPTATAVKDDTADADPEDVVMPQDDKPSRTPKKRPRN
KRHGRGGR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcgtcgccgcaacatcttcatcctgctcttcgtcgcaggactcgtgatcgca
tccattgcggtgatcgcgacgaagcagacccgcctcgggctcgacctgcagggtggcgtc
gagctcgtctacgaggcgagtcccacgccgcagcagccggtggtcgaccaggccgcgctc
gatcgcgcgatcgacgtcatgcgcgagcgcgtcgaccgcctcggtgtcgccgagcccgag
atccagcggtccggcgagaaccagatctccgtcgcgctgccggacgtgcaggacgccgac
aaggcccagcggcaggtcggccaggtcgcccagctcttcttctacgactgggagaccaac
gtcatcgggcccgacggcgaggtcgcgccggacgatcccgaggtcacgggcggccccagc
gccgggcgcgtcggcggcatctcgtactacgacgcggtcgtgcgcgcgtccgagcagccg
gccgcggagggcgaggccgcgaagaacgtcagccacgacgggctgtacttcctgctcgat
cagaagaaggaacgcgtcgtcggcggcccggaggaggagaagcaggacctcttcagcgag
cgcccggacgacgccgaagccccggactgcaaggagggcggggagtcgacgctgtgcgtc
gagaccgtgcagccgggcaccacgatcgtccgcgccgagcaggccgacgaccaggcggag
atcaaggatccgaacaacgcccagtactacgtgctgcgcgaccgcgtcgccctcaagggc
acggacatcaagaaccccgagcagcagttcgaccagggcgccgggggcagcgggcagccg
atcgtcacgttcgacttcaccgactcgggccgcaagacctgggaagaggtcacgcgcggc
atcgcccagcgcggcctcgagagcttcgcgccgggctccgacccgcagtcggcggcacag
cacttcgcgatcgtgctcgacaacgagctcgtcagcgtgccgttcatcgacttccagcag
aacccggacggcatcgacgggcgcaacggctcacagatcgagggcggcttcacgatcgag
tccgcgcaggagctcgcgaacctcctgaagaccggcgcgctcccggtcaagctcgacctg
atcagccagtcgcagatctcggcctcgctcggtcagcaggcgctcgaccagagcctcatc
gccgccgcggccggcatgttcgtcgtcgcgctgttcctcctgatcttctaccgcgtgctc
ggcgtcatcgccgtcggcgccctcgggatctacgcgctcctgctcttcgcgctcatcaag
atgatcccgatcgtgatgaccctgccgggcatcgcgggcctcgtgctcacgatcggcgtc
gccgcggacgcgaacatcgtcatcttcgagcgcgtcaaagaggagatccgcgccgggaga
tccgtccaggccggcatcgcggcgggctaccgcaagggcctcacggcgatcatcgacgcg
aacgtcgtcaccgtcatggtcgcgttcatcctcttcgtgctcgcgacggccggggtcaag
ggcttcgcgttcacgctcggcgtcggcacgatcgtctcgttcctcaccgcggtcgtgttc
acccaggcgatcctcggcacgatgggccggtcgcgcctcctggcccggccgtccgcgctc
ggcgcaggcaagccggcgcgtgacatcacgttcgacttcatgggcgcgtcgcgctggttc
ttctccggatccggcgtgatcctcgccatcggcgcgctggcgatcggcgcgaacggcatc
aacttcggcatcgacttcgagtcgggcacgcggatcaagaccgccgtcgagaagaccacc
aacgaggacgggatccgcgcggtcatgtcctccgtgggctacggcgacgccaagattcag
cgcgtccaggagccggagctcggcgagaacgtcttccagatctccacgccgtcactcgag
ccggccgacgtgcaggaggtccgggccgcgctcgacgaggagttcggcgtcggtgacgag
ttctccaacagctcgatcggcccgacgttcggcgagaccgtggcgcggacggcggtgatc
gcgatcatcgcgtcgttcctcgtgatcgcggcgtacatcgccatcagattcgaatggaag
tacgcggtgccgctgctcatcgcggtcatgcacgacctcctcatcacggcgggcatctac
gcgctgttcggattcgaggtgacgagcgccaccgtggccgccttgctcaccatcttgggc
ttctcgctctacgacacgatcatcgtgttcgaccgagtacgcgagaacgtgccgcgcatg
ccgcgcgccgcgttcagccagatcgtcaaccgctcgatgagcgaggtcatcgtccgatcg
ctggcgacctcgttctgcaccctgctgccggtcctcgcgctgttcgcgttcggtggcgag
acgctgcggtcgttcgccgtcgcgctgatcgtcggcacgatctccggcacctactcgtcg
gtcttcatcgcctccccggtgctcacgcactggaaggagcgcgagcgcgtgtggcgccgg
cgccgcggcatcatcgagtccgagcttggctccgtccccgcctacgcgaccgccgtcggc
ggcggtcccgtggacgtcgcgccgacggagcgcaagcgcccgtcgcgccgactgacgtcg
ccggacgatccgcaggcggtctcgaaggaggagttcgacgcgatggtccaggacctgcac
gtcgacgccccaccgaccgcgaccgcggtgaaggacgacacggccgacgccgatccggag
gatgtcgtcatgccgcaggacgacaagccgtcgcggacgccgaagaagcggccgcgcaac
aagcgacacggacgcggaggccgctga
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