Svornostia abyssi: LRS13_17985
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Entry
LRS13_17985 CDS
T09859
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj00750
Vitamin B6 metabolism
pbaj01100
Metabolic pathways
pbaj01240
Biosynthesis of cofactors
Module
pbaj_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
LRS13_17985 (pdxS)
Enzymes [BR:
pbaj01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
LRS13_17985 (pdxS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
His_biosynth
Dus
TetR_C_27
NanE
NMO
IGPS
OMPdecase
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
UUY02567
UniProt:
A0ABY5PD65
LinkDB
All DBs
Position
complement(3581864..3582748)
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AA seq
294 aa
AA seq
DB search
MRDEATFRVKVGLAEMLKGGVIMDVVNADEAKIAEDAGASAVMALERVPADIRRDGGVAR
MSDPAMIKGIQEAVTIPVMAKARIGHFAEAQVLESLQVDFIDESEVLTPADHAHHIDKWA
FKIPFVCGATNLGEALRRIGEGACMIRSKGEAGTGDIVEAVRHLREITGAIRRLTMLDEA
ELFVAAKELQAPYDLVRKTAQDGTLPVPMFCAGGIATPADASLVMQLGAQAVFVGSGIFK
SEDPAARARAIVEATTHYADPARVAAASEGLGNAMQSLEARKLDDTELLAGRGW
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcgagacgaagcgacgttccgggtcaaggtcggcctggccgagatgctgaagggcggc
gtcatcatggacgtcgtcaacgccgacgaggcgaagatcgccgaggacgccggcgcctcg
gccgtcatggcgctggagcgcgtacccgcagacatccgccgtgacggcggcgtggcgcgg
atgagcgaccccgcgatgattaagggcatccaggaggccgtgacgattccggtcatggcg
aaagcccggatcggccacttcgccgaggcgcaggtcctcgagtcgctgcaggtcgacttc
atcgacgagtccgaggtcctgacgcccgccgaccacgcgcaccacatcgacaagtgggcg
ttcaagatcccgttcgtctgcggcgcgacgaacctcggcgaggcgctgcggcgcatcggc
gagggcgcgtgcatgatccgcagcaagggcgaggccggcaccggcgacatcgtcgaggcc
gtccgccatctgcgcgagatcaccggcgcgatccgccgcctgacgatgctcgacgaggcc
gagctgttcgtcgccgccaaggagcttcaggcgccgtacgacctcgtgcgcaagaccgcg
caggacggcacgctgccggtcccgatgttctgcgcgggcggcatcgccaccccggcggac
gcgtcgctcgtcatgcagctcggcgcgcaggcggtgttcgtcggctcgggcatcttcaag
agcgaggatcccgccgcccgggcgcgggccatcgtcgaggcgaccacccactacgcggat
ccggcgcgcgtcgccgccgcgtcggaggggctcggcaacgcgatgcagagcctcgaggcg
cgcaagctcgacgacaccgagctgctcgccggccgcggctggtga
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