Svornostia abyssi: LRS13_18190
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Entry
LRS13_18190 CDS
T09859
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LRS13_18190 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbaj03400
]
LRS13_18190 (mutM)
Enzymes [BR:
pbaj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LRS13_18190 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LRS13_18190 (mutM)
DNA repair and recombination proteins [BR:
pbaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LRS13_18190 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
FlhC
Desulfoferrod_N
Motif
Other DBs
NCBI-ProteinID:
UUY02603
LinkDB
All DBs
Position
complement(3621814..3622683)
Genome browser
AA seq
289 aa
AA seq
DB search
MPELPEVETIRRQLAPKVEGRTLRELRILDPRWTQPLAPAAVVDALQGRRVAALERRGKY
LIWRAEGDIHLLIHLRMTGTLLWEPADADAAHERVRFDLDGGRLSFCDPRRFGTGELAIG
GPALAAFLDARLGAEPFSDAFTGAYLRAQARGRRAPVKAFLLDQRRIAGVGNIYADEALF
RARIHPLRPVGSLTRAQYDALRDAVVASLAAGIDAGGATIDDFRHVDGVYGGFQHDFLVH
RRRGEPCTVCGGEIVKFVAAGRGTYACERCQPRPRAARRTRGQAASARS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctccccgaggtcgagacgatccgccgtcagctcgccccgaaggtcgagggg
cgcaccctgcgcgagctgcggatcctcgacccgcgatggacgcagccgctggccccagcg
gcggtcgtcgacgcgctgcagggccgccgggtcgcggccctcgagcgccgcggcaagtac
ttgatctggcgcgcggagggcgacatccatctgctcatccacctccggatgacaggcacg
ctgctgtgggagcccgccgacgcggacgcggcccacgagcgcgtgcggttcgacctggac
ggcgggcggctgtcgttctgcgatccccgccggttcgggaccggggagctggccatcggc
gggccggcgctggcggcgttcctcgacgcgcggctcggggcggagcccttcagcgatgcg
ttcaccggcgcgtacctgcgcgcccaggcccggggccgacgtgcgcccgtgaaggcgttc
ctgctcgatcagcgccgcatcgcgggcgtcgggaacatctacgccgacgaggcgctgttt
cgcgcgaggatccatccgctgcgaccggtggggtccctgacccgtgcgcagtacgacgcg
ttgcgcgacgcggtcgtggcgtcgctcgctgcgggcatcgacgcgggcggggcgacgatc
gacgatttccgccacgtcgacggggtgtacggcgggtttcagcacgacttcctcgtgcac
cgtcgtcgcggcgagccgtgcaccgtctgcggcggcgagatcgtgaagttcgtcgccgcg
gggcggggaacctacgcgtgcgagcgctgccagccgcggccgcgcgctgcgcgcaggacg
cgcggtcaggccgcgtcggcgaggagctga
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