Svornostia abyssi: LRS13_18390
Help
Entry
LRS13_18390 CDS
T09859
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pbaj
Svornostia abyssi
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbaj03016
]
LRS13_18390
Enzymes [BR:
pbaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LRS13_18390
Transfer RNA biogenesis [BR:
pbaj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LRS13_18390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
UUY02643
LinkDB
All DBs
Position
3660212..3661420
Genome browser
AA seq
402 aa
AA seq
DB search
MDELATSRDVEEVADAARATGRFGIDTEFMGEGRYRSLLCVVQVAVEQPGGEVRVIVVDA
LDDDVDVTPLAEILGDPAIEVVMHAARQDVPLLKRTWDVPVTNLFDTQVAAGFAGLRAQL
GYDPLLQEMLGVRLRKSASFTKWDRRPLTEEQVRYAREDVLHLLQVATKLQERLAERGRL
EWAREECRPLEEISDIRAVDMVFAKLPKINGLDPKVRAVAWELAAWREETAREGDRPVTT
VLNDAALVEIAKRRPADQRDLEQIRGLNEGALRRRGKAIVAAVQRGRERDPIPNTASRHV
QPDGRDAPLIALAEALLRTRAMDAELAYELIAARADLQRIVTAVRTDQDTSAAAQPDVRT
LQGWRRELVGEELLELLHGRRELRVGPGLGVEVRSADAEPAA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctcgccaccagccgcgacgtcgaggaggtcgcggacgccgcccgcgcgacc
gggcgtttcggcatcgacaccgagttcatgggcgaggggcggtaccgatcgctgctgtgc
gtcgtgcaggtcgccgtcgagcagcccggcggtgaggtgcgcgtcatcgtcgtcgacgcg
ctcgacgacgacgtggacgtgaccccgctggccgagatcctcggcgacccggcgatcgag
gtcgtcatgcacgcggcgcggcaggacgtgccgctgctcaagcgcacgtgggacgtgccg
gtcacgaacctcttcgacacgcaggtggccgccgggttcgccgggttgcgcgcgcagctc
ggctacgatccgctcctgcaggagatgctcggcgtgcgcctgcgcaagagcgcgagcttc
acgaagtgggaccgccggcccctcaccgaggagcaggtccggtacgcccgcgaggacgtg
ctgcatctcctgcaggtcgccacgaagctgcaggagcggctcgccgagcgcgggcggctg
gagtgggcccgtgaggagtgccgcccgctggaggagatctccgacatccgcgcggtcgac
atggtcttcgcgaagctgccgaagatcaacggactcgacccgaaggtccgcgccgtggcc
tgggagctggccgcctggcgcgaggagacggcccgcgagggcgaccgtccggtcacgacc
gtgctcaatgacgcggcgctcgtggagatcgccaagcgccgccccgccgaccagcgtgac
ctcgagcagatccgcgggttgaacgagggcgcgctgcgccgccggggcaaggccatcgtc
gcggccgtccagcgcggccgcgaacgcgatccgatccccaacaccgcctcgcgccatgtc
cagcccgatggccgggacgcgccgctcatcgcgctcgccgaggcgctcttgcgcacccgg
gcgatggacgcggagctcgcgtacgagctcatcgccgcgcgggccgaccttcagcgcatc
gtcaccgccgtgcgcaccgaccaggacacgagcgcggccgcccagcccgacgtccgcacg
ctgcagggctggcgccgggagctcgtcggcgaggagctgctcgagctgctgcacgggcga
cgcgaactgcgcgtcggccccgggctgggtgtcgaggtccgcagcgcggacgcagagcct
gccgcctga
DBGET
integrated database retrieval system
