Svornostia abyssi: LRS13_18450
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Entry
LRS13_18450 CDS
T09859
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
pbaj
Svornostia abyssi
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbaj02044
]
LRS13_18450
02035 Bacterial motility proteins [BR:
pbaj02035
]
LRS13_18450
Secretion system [BR:
pbaj02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
LRS13_18450
Bacterial motility proteins [BR:
pbaj02035
]
Pilus system
Pilus assembly proteins
LRS13_18450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Amphi-Trp
Baculo_11_kDa
Motif
Other DBs
NCBI-ProteinID:
UUY02655
LinkDB
All DBs
Position
complement(3679128..3680336)
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AA seq
402 aa
AA seq
DB search
MSTFTYTVVDSTGSQSKGEVEAETLQSVTDQLRQRGLIVLNVGEKKQSKEIELPWTGRIK
SADLTIMTRQLSTMVSSGMSILRALNVLERQTENEKLKKILATVRRNVESGVPLSDALER
HPEVFNPLYVSMVRAGETGGVLESSLHRVADQLEKDDALRRQIKSAMVYPTVIVTFAIIV
LLGLVTFLVPVFAGIFKQFDGELPMITRFTVGMSDLITGRWYLILAGTIAAVWGFRRWKS
SENGRRQWQRFCLRIPMKIGDIVQKVALARWSRTLSALLAAGVPLLQALEITGKTAGNVV
VEDAMDDIRASVRSGGSISAPMKTATIFPPMVTHMVGVGEETGALDTMLSKIADFYEDQV
AAAVKSLTSILEPVMLVVVGGIVGFVVIAMYLPMFKLYDQIK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgttcacctacaccgttgtcgactcgaccgggtcgcagagcaagggcgaggtc
gaggccgagacgctgcagtcggtcaccgaccagctgcgccagcgcggcctcatcgtcctg
aacgtcggcgagaagaagcagtcgaaggaaatcgagctgccgtggaccggccggatcaag
tccgccgatctcacgatcatgacccgtcagctgtcgacgatggtgtcgagcggcatgagc
atcctgcgcgcgctgaacgtcctggagcgccagaccgagaacgagaagctgaagaagatc
ctcgcgacggtccgccggaacgtcgaatcgggtgtgccgctgtccgacgcgctggagcgt
cacccggaggtcttcaacccgctgtacgtctcgatggtccgcgccggtgagaccggcggc
gtgctcgagtcctcgctgcaccgggtcgcggaccagctggagaaggacgacgcgctgcgc
cgccagatcaagtcggcgatggtctacccgacggtcatcgtgaccttcgcgattatcgtc
ctgctcgggctcgtcacgttcctcgtgccggtgttcgccgggatcttcaagcagttcgac
ggcgagctgcccatgatcacccgcttcaccgtcggcatgtcggacctcatcaccggccgc
tggtacctcatcctcgcgggcacgatcgccgcggtctggggattccgccgctggaagagc
agcgagaacggccgccgccagtggcagcgcttctgcctgcgcatcccgatgaagatcggg
gacatcgtccagaaggtcgcgctcgcgcgctggtcgcgcaccctgtcggcgctgctcgcc
gcaggtgtgccgctgctgcaggcgctggagatcaccggcaagacggcgggcaacgtcgtc
gtcgaggacgcgatggacgacatccgtgcgagcgtccgctcgggcggctcgatcagcgcg
ccgatgaagacggcgacgatcttcccgcccatggtcacgcacatggtcggcgtcggtgag
gagaccggcgcgctcgacacgatgctgtcgaagatcgcggacttctacgaggaccaggtt
gctgcggcggtcaagtcgctgacgtcgatcctcgagcccgtcatgctcgtggtggtcggc
ggcatcgtcgggttcgtggtgatcgcgatgtacctgccgatgttcaagctgtacgaccag
atcaagtag
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