Svornostia abyssi: LRS13_18530
Help
Entry
LRS13_18530 CDS
T09859
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LRS13_18530 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbaj01007
]
LRS13_18530 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbaj03016
]
LRS13_18530 (aspS)
03029 Mitochondrial biogenesis [BR:
pbaj03029
]
LRS13_18530 (aspS)
Enzymes [BR:
pbaj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
LRS13_18530 (aspS)
Amino acid related enzymes [BR:
pbaj01007
]
Aminoacyl-tRNA synthetase
Class II (A)
LRS13_18530 (aspS)
Transfer RNA biogenesis [BR:
pbaj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LRS13_18530 (aspS)
Prokaryotic type
Other AARSs
LRS13_18530 (aspS)
Mitochondrial biogenesis [BR:
pbaj03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
LRS13_18530 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UUY02667
LinkDB
All DBs
Position
complement(3696995..3698758)
Genome browser
AA seq
587 aa
AA seq
DB search
MTTPLRANGYRNAWAGDLVEPRDRARVAGWVHRRRDHGGLIFIDLRDRTGIVQIVFDPDE
SGAEAFAAAERLRSEHVLSAEGPVIGRGEEHINPNIPTGRVELRVHDLEVLAAAETPPFP
IDEDGEVDEVLRLRHRALDLRRDRMQRTMRLRHDVVREIREHLSAEGFMEIETPILTRST
PEGARDFLVPSRNAPGAFYALPQSPQLFKQLLMFAGFERYFQIARCFRDEDLRADRQPEF
TQLDVEMSFVTEDDVIDAMERTMAKVFTLAELDVPAPPYRRMPYAEAMARYGSDRPDTRF
GLEIVDVGEELRGSDFKVFEGVLSGGGVVRALNLGNAGMSRSELDGLNDVVQRHGGKAVA
WAVVEDGGGWRSPIAKFLGEERIAAATAKLTASTGDILLFVADKERIAAPAIGGLRLELG
HRLGLVPEGHHDLLWIVDFPMFEFDDGEERWNALHHPFTAPLGDLSDPGGLTSRAYDLVL
DGTEIGGGSIRIHDPAVQERVLEILGMDAEEANARFGFLIEALKHGAPPHGGIAFGIDRI
VAICAGRESIRDVIAFPKTASGADPLTGAPAAVDDRQLRELALRRST
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgccgctgcgcgccaacggctaccgcaacgcgtgggccggcgacctcgtcgag
ccgcgcgaccgcgcgcgcgttgccgggtgggtgcatcggcgccgggaccacggcggcctg
atcttcatcgacctgcgcgaccgcaccggcatcgtgcagatcgtcttcgacccggacgag
tccggcgccgaggcgttcgcggccgccgagcgcctgcgctccgagcacgtcctctccgcc
gaagggcccgtcatcgggcgcggcgaggagcacatcaacccgaacatcccgacgggccgc
gtcgagctgcgcgtgcacgacctcgaggtcctggcggccgccgagacgccgccgttcccg
atcgacgaggacggcgaggtcgacgaggtgctgcggctgcgccaccgcgcgctggacctc
cgccgcgaccgcatgcagcgcaccatgcgcctgcgccacgacgtcgtccgtgagatccgt
gagcacctctccgccgagggcttcatggagatcgagacgccgattctcacccgctcgacg
cctgaaggcgcccgtgacttcctcgtgccgtcgcgcaacgctcccggcgcgttctacgcg
ctgccgcagagcccgcagctcttcaagcagctcctgatgttcgccgggttcgagcggtac
ttccagatcgcgcggtgcttccgcgacgaggacctgcgcgccgaccgccagcccgagttc
acgcagctcgacgtcgagatgtcgttcgtcaccgaggacgacgtcattgacgcgatggag
cgcacgatggcgaaggtcttcaccctcgccgagctcgacgtgcccgcgccgccgtaccgg
cgcatgccgtacgccgaggcgatggcccgctacgggtcggatcgcccggatacgcgcttc
ggcctggagatcgtcgacgtgggcgaggagctgcgcggctcggacttcaaggtcttcgag
ggcgtgctcagcggcggcggcgtcgtgcgcgcgctgaacctcggcaacgcggggatgtcg
cggtccgagctcgacgggctgaacgacgtcgtgcagcgtcacggcggcaaagcggtcgcg
tgggcggtcgtcgaagacggcggtgggtggcgctcaccgatcgcgaagttcctcggcgag
gagcggatcgcggcggcgacggccaagctcaccgcgtcgaccggggacatcctgctgttc
gtcgccgacaaggagcgcatcgccgccccggcgatcggcgggctgcgcctcgagctcggc
caccggctcggcctcgtgccggagggtcaccacgacctgctctggatcgtcgacttcccg
atgttcgaattcgacgacggcgaggagcgctggaacgcgctgcaccacccgttcaccgcg
ccgctcggcgacctgtccgacccgggggggctgacgtcgcgggcctacgacctcgtgctc
gacggcaccgagatcggcggcggctcgatccgcatccacgatcccgcggtccaggagcgc
gtgctcgagatcctcgggatggacgcggaggaggccaacgcgcgcttcgggttcctcatc
gaggcgctgaagcacggcgcgccgccgcatggcggcatcgcgttcggcatcgatcgcatc
gtcgcgatctgcgcgggccgcgagtcgatccgtgacgtcatcgcgttcccgaagaccgcg
agcggagccgacccgctcacgggcgcgccggcggcggtcgacgaccgtcagttgcgcgag
ctggcacttcgacgctcaacctga
DBGET
integrated database retrieval system
