KEGG   Svornostia abyssi: LRS13_19430
Entry
LRS13_19430       CDS       T09859                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pbaj  Svornostia abyssi
Pathway
pbaj03030  DNA replication
pbaj03410  Base excision repair
pbaj03420  Nucleotide excision repair
pbaj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbaj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LRS13_19430 (polA)
   03410 Base excision repair
    LRS13_19430 (polA)
   03420 Nucleotide excision repair
    LRS13_19430 (polA)
   03440 Homologous recombination
    LRS13_19430 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbaj03032]
    LRS13_19430 (polA)
   03400 DNA repair and recombination proteins [BR:pbaj03400]
    LRS13_19430 (polA)
Enzymes [BR:pbaj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LRS13_19430 (polA)
DNA replication proteins [BR:pbaj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LRS13_19430 (polA)
DNA repair and recombination proteins [BR:pbaj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LRS13_19430 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LRS13_19430 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc
Other DBs
NCBI-ProteinID: UUY02836
LinkDB
Position
complement(3893032..3895605)
AA seq 857 aa
MSDRPERLFLIDGNSLVYRAFFALPESIATSTGQPTNAIFGFASMLVKILTEHGVQPTIV
VWDAGLSGRKEISVDYKAQRARRPDLLREQWPHFAPLVDAFGYKNVSVEGYEADDVIASI
AERAREKGIPSTIVTGDRDAFQLIDPDGVVTVMATSRGITETKLYDHQAVIDRYGIAPEL
IPDFYGLKGDTSDNIPGVPGIGDKTAAQLLQAWGDLDGVLSHIDEISGAKRKENLTNHAD
DARMSKQLATIQRDVPVDIDVEHELGREPDRSRLREVFREFELRDPLRRLEEVFGEDGAA
PTPDSAVKLQAAVREGTAADAAALPGDELAVAIAEPTIEEGQLLALEERWRFAVASGDQV
VVGHVDTPEELVDTLGDRPVTAHDVKALRRVPPRIAHDTLLGAYLLEPARRGYPFAELCS
ERGIAADTGDELADTAILTAALTAWQREQLEERDLSRLLHDMELPLVPVLRDMELEGVRL
NVERLNEVGTRVRDEIHILEREIWDLADEEFLIASPQQLGSVLFEKLGLSRKRRGKTGFS
TDARVLQAIRDEHPIVPKIERWRELNQLTKTYLDTLPHLTDDQSRIHTTFEQAVAQTGRL
ASKDPNMQNVPVRTALGREIRGCFEAADGDVLLSIDYSQIELRVLAHIADEPVLKEIFVR
GEDVHSATASQVFGIPPEQIDVGQRSKAKMVNYGIVYGLTDYGMADRLGIERDEAKEFID
AYFARFPAVKAYIDTTIEQAREYGFVMTMWGRRRQIPELKARNWQVRSLGERLAVNTPIQ
GTAADILKLAMIRTATLLEGSAVRPILTVHDELLFEGPPDEVASAQPDIVKAMVDVWEHT
PPLEVDAGVGKTWLDAK
NT seq 2574 nt   +upstreamnt  +downstreamnt
gtgtccgaccgtcccgagcgcctcttcctgatcgacggcaattcgctcgtgtaccgcgcg
ttcttcgcgctgcccgagtcgatcgccacctccaccggccagccgacgaacgcgatcttc
gggttcgcctcgatgctcgtgaagatcctcaccgagcatggcgtgcagcccacgatcgtg
gtgtgggacgccggcctgtcggggcgcaaggagatctcggtcgactacaaggcgcagcgc
gcccgccgccccgatctgctgcgggagcagtggccgcacttcgccccgctcgtcgacgcg
ttcggctacaagaacgtctcggtcgagggctacgaggccgatgacgtcatcgcctccatc
gccgagcgggcacgcgagaagggcatcccctccacgatcgtcacgggcgaccgcgacgcg
ttccagctcatcgaccccgacggcgtcgtcacggtcatggcgacatcgcgcggcatcacc
gagacgaagctctacgaccaccaggccgtcatcgaccggtacggcatcgcaccggagctg
atccccgacttctacggtctgaagggggacacgtcggacaacatccccggcgttcccggc
atcggcgacaagaccgccgcgcagctcctgcaggcgtggggcgacctcgacggcgtgctc
agccatatcgacgagatctccggcgccaagcgcaaggagaacctcaccaaccacgccgac
gacgcgcggatgagcaagcagctggccacgatccagcgcgacgtgcccgtggacatcgac
gtcgagcacgagctgggccgcgagccggaccggtcgcgcctgcgggaggtcttccgcgag
ttcgagctgcgcgacccgctgcgccgcctggaggaggtcttcggcgaggacggcgcggcg
ccgacgccggactcggccgtgaagctgcaggctgccgtccgcgagggcacggccgcggac
gccgccgcgctgcccggcgacgagctcgccgtcgcgatcgcggagccgacgatcgaagag
gggcagctgctggcgctcgaggagcgctggcggttcgccgtcgcgtccggcgaccaggtc
gtcgtcggtcacgtcgacacgccggaggagctggtcgacacgctcggcgaccggccggtc
accgcgcacgacgtcaaggcgctgcggcgcgtcccgccgcgcatcgcgcacgacacgctg
ctcggcgcgtacctgctcgaacccgcccgccgcggctacccgttcgccgagttgtgctcc
gagcgcgggatcgccgccgacaccggggacgagctggccgacaccgccatcctcaccgcc
gcgctcacggcctggcagcgcgagcagctcgaggagcgcgacctcagccggctgttgcac
gacatggagctgccgctcgtgcccgtcctgcgggacatggagctcgagggcgtgcgcctg
aacgtcgagcggctcaacgaggtgggcacgcgggtgcgcgacgagatccacatcctcgag
cgtgagatctgggacctcgccgacgaggagttcctcatcgcctcgccgcagcagctgggc
tcagtgctcttcgagaagctcggcctctcgcgcaagcgccgcggcaagacgggcttctcg
accgacgcccgggtgctgcaggccatccgcgacgagcacccgatcgtgccgaagatcgag
cgctggcgcgagctcaaccagctgacgaagacctatctcgacacgctcccgcacctcacc
gacgaccagtcgcggatccacacgacgttcgagcaggccgtcgcgcagaccgggcggctg
gcgtcgaaggacccgaacatgcagaacgtcccggtgcgcaccgcgctgggccgcgagatc
cgcggctgcttcgaggcggccgacggcgacgtgctgctgagcatcgactactcgcagatc
gagctgcgcgtgctcgcgcacatcgccgacgagccggtgctgaaggagatcttcgtgcgc
ggcgaggacgtgcactccgccacggcgtcgcaggtcttcggcatcccgccggagcagatc
gacgtgggccagcggtcgaaggcgaagatggtcaactacggcatcgtgtacgggctgacc
gactacggcatggccgaccgcctcggcatcgagcgtgacgaggccaaggagttcatcgac
gcgtacttcgcccgcttcccggcggtgaaggcctacatcgacacgacgatcgagcaggcg
cgcgagtacggcttcgtcatgacgatgtggggccgccgccggcagatccccgagctgaag
gcgcgcaactggcaggtccggtcgctcggcgagcgcctggcggtcaacacgccgatccag
ggcaccgcggcggacatcctgaagctcgcgatgatccgcaccgccacgctgctcgagggc
tcggcggtccggccgatcctcacggtgcacgacgagctgctgttcgaggggccgccggac
gaggtggcctccgcgcagccggacatcgtcaaggcgatggtcgacgtgtgggagcacacc
ccaccgctggaggtcgacgcgggcgtgggcaagacctggctggacgccaagtag

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