Parviterribacteraceae bacterium J379: LRS13_21245
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Entry
LRS13_21245 CDS
T09859
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
pbaj
Parviterribacteraceae bacterium J379
Pathway
pbaj00910
Nitrogen metabolism
pbaj01100
Metabolic pathways
pbaj01120
Microbial metabolism in diverse environments
Module
pbaj_M00531
Assimilatory nitrate reduction, nitrate => ammonia
pbaj_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
LRS13_21245 (nirB)
Enzymes [BR:
pbaj01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
LRS13_21245 (nirB)
BRITE hierarchy
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Pyr_redox
NIR_SIR_ferr
Rubredoxin_C
Pyr_redox_3
NAD_binding_9
NAD_binding_8
DAO
NAD_binding_7
3HCDH_N
AlaDh_PNT_C
GIDA
TrkA_N
Lycopene_cycl
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
UUY03170
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All DBs
Position
4237910..4240333
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AA seq
807 aa
AA seq
DB search
MSERDRIVIVGGGIAGQAVAEALRERDPDVAITLVCGEDALPYDRIRLSEILVDGSDAAT
LALRPEEWFADHDVEVLLGRWVEGGDLDAGTLVLDGAEELTFDKLVLATGSQPLLPPIPG
IGLPGVHPFRDPADCEAIRQSATTATHAAVIGGGLLGLEAARGIAAQGCDVTVIHLVDRL
MERQLDPVSAAMLEPSLADLNIKVRLESATQAITGGDRARGLQFKDGSSMDADLVVVSIG
IRPEKTLANTLGLATNRGIVVADSMRTSHPRVWSVGECAEHAGMVYGLVAPILEQARVAA
DTLLDRSAAYTGSILSAKLKVAGIDLVTVGEADGETSAVVSDAAARTYRKLSVRDGRAVG
AILLGDVRGAEALMAAVRAAEEVTDPLDALAAASAAGPADLPDEAQICNCNGVCKGDLVA
AVEVDGCTTPREVMSRTRAGTGCGSCKPAVIDIVAMAAGGLNEEPAYLCACRKQTRDELA
DQIRSQGLQSVSEVSQCCGTGRDCGACKPALAYLVSEVNDNRHREERHARYINDRVHANI
QKDGTFSVVPKMRGGVTTPSELRRIADVAEKYEIPLVKVTGGQRIDLLGVTKEDLPKVWR
DLDMPSGFAYAKAVRTVKTCVGEQHCRFGLGDSMGFGVEIEKAWEGLHTPAKVKAGVSGC
PRNCAEATIKDIGIVAVEGGWQVRIGGAAGASVREADILDTVETKAEAMRLSTTFLQYYR
ENADYKERTYDFVPRIGLDEIKRIVTDETIGAALRERFRLAKAATVDPWLERDDPYHPRQ
FTDLDQQPEDDGPPTPVVVGPPEEARR
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcgagatcggatcgtcatcgtcggaggcgggatcgccgggcaggccgtggcc
gaggccctgcgcgagcgcgaccccgatgtcgccatcacgctggtgtgcggcgaggacgcg
ctgccgtacgaccgcatccgcctgtcggagatcctcgtcgacggcagcgacgccgccacg
ctcgcgctgcgccccgaggagtggttcgccgaccacgacgtcgaggtcctgctcggccgc
tgggtcgaaggcggcgacctcgacgcgggcacgctcgtgctcgacggcgccgaggagctc
acgttcgacaagctcgtcctggccaccggttcgcagccgctgctcccgccgattccgggc
atcgggctgcccggcgtccacccgttccgtgacccggccgactgcgaggcgatccgccag
tccgccacgaccgcgacgcacgcggctgtcatcggcggcggcctgctcgggctcgaagcc
gctcgcggcatcgccgcccagggctgcgacgtcacggtcatccacctcgtcgaccgactc
atggagcgccagctcgaccccgtgagcgccgccatgctcgagccctcgctggccgacctg
aacatcaaggtccggctggagagcgccacccaggcgatcacgggcggcgaccgcgcgcgc
ggcctgcagttcaaggacggctcgtcgatggacgccgacctcgtggtcgtctcgatcggc
atccgccccgagaagaccctcgccaacacgctgggcctcgccacgaaccgcggcatcgtc
gtcgccgactccatgcgcacgagccacccgcgcgtgtggtccgtcggcgagtgcgccgag
cacgcgggcatggtctacggcctcgtcgcaccgatcctcgagcaggcgcgcgtggccgcg
gacaccctgctcgaccgcagcgccgcctacaccgggtcgatcctcagcgcgaagctgaag
gtcgccggcatcgacctcgtcaccgtcggcgaggccgacggcgagacctccgcggtcgtg
agcgacgccgcggcgaggacctaccggaagctgagcgtccgtgatgggcgagccgtcggc
gccatcctcctcggggacgtgcgcggcgccgaggcgctgatggcggcggtgcgcgcggcc
gaggaggtcaccgaccccctcgacgcgctcgccgccgcctccgccgccggcccggccgac
ctccccgacgaggcgcagatctgcaactgcaacggcgtctgcaagggtgacctcgtcgcc
gccgtcgaggtcgacggctgcaccacgccgcgcgaggtgatgtcgcgcacccgcgcgggc
accggctgcgggtcgtgcaagcccgcggtgatcgacatcgtcgcgatggccgccggcggc
ctgaacgaggagccggcctacctgtgtgcctgccgcaagcagacacgcgatgagctggcc
gaccagatccggtcgcagggcctgcagtccgtctccgaggtgtcgcagtgctgcggcact
ggacgcgactgcggcgcctgcaagcccgcgctcgcctacctcgtctccgaggtcaacgac
aaccgtcaccgcgaggagcgccacgcgcggtacatcaacgaccgtgtccacgcgaacatc
cagaaggacggcacgttcagcgtcgtcccgaagatgcgcggcggcgtgacgaccccgagc
gagctgcgccgcatcgccgacgtcgccgagaagtacgagatcccgctcgtgaaggtgacg
ggcggccagcggatcgacctgctgggcgtcacgaaggaggacctgccgaaggtctggcgc
gacctcgacatgccgtcgggcttcgcgtatgccaaggccgtgcgcaccgtcaagacgtgc
gtcggcgagcagcactgccgcttcggcctgggcgactcgatggggttcggcgtcgagatc
gagaaggcctgggaaggcctgcacaccccggcgaaggtcaaggccggcgtgtcgggctgc
ccgcgcaactgcgccgaggccacgatcaaggacatcggcatcgtcgccgtcgagggcggc
tggcaggtgcggatcggcggcgccgcgggcgcgagcgtccgcgaggccgacatcctcgac
accgtcgagacgaaggccgaggcgatgcgcctctccacgaccttcctgcagtactaccgc
gagaacgcggactacaaggagcgcacgtacgacttcgtgccgcgcatcgggctcgatgag
atcaagcgcatcgtgaccgacgagaccatcggcgccgccctgcgcgaacggttccgcctc
gcgaaggccgcgaccgtcgacccgtggctcgagcgcgacgacccgtaccacccgcgccag
ttcaccgacctggatcagcaaccagaagacgacggcccgcccaccccggtcgtcgtcggc
ccgcccgaggaggcccgccgatga
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