Svornostia abyssi: LRS13_21730
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Entry
LRS13_21730 CDS
T09859
Name
(GenBank) PD-(D/E)XK nuclease family protein
Organism
pbaj
Svornostia abyssi
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
UUY03262
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Position
complement(4328551..4330923)
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AA seq
790 aa
AA seq
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MSRCSAGRRAELAARDAVAVLSANFRSAPEILDAVNAVFAPRFGETFTPLRPGRELPRSE
DPVIELLLTDAAAWDDETDPARPDLGALPGDKRWRHAEARLLAQRIADLVAAGEPPEDIV
VLVRALGDLPAYERALEEQGLSVLASGGRGYWGRQVVRDLCGWLAALANPRDEAALFGVL
ASPLVGLSSDGLLHVAQAGRGRVWETIRGGDADARLADDDRDRLRRFAARFAHERTLAGR
LAIDELLRRIIEAADYDLHVLRLPGGQRRLANVHKLLRLAAAQQGAGADLRAFVDHATAE
LDADAREGDAPVELSGSRAIRLMTIHAAKGLEFGIVCVADLGRELRRTVGAVLVDGDRVG
LRLRTFDGTSEPALAHDAIKQDIVAAERAEEERIGYVALTRAERRLILSGGVKVDDWPNA
HKPNASLLSWLGPALVPGIQSGLLDDAEPVRDVRVAGDGPRRPLVRCALNRPATVGRVLR
PEHAAPAGRELPAARPLGMRPPAAAAPVTAPVPARVSFTQLADHRACGYRYYLRRILRLP
EERADAVARDAAAQEPAGLEARLRGSIAHVLLEELDPARPGVWAPGGDPAARAALVRDMA
AGWDAALDDEQAREIAGLVAGFAAAPLAARLAKARDVHREHPFAVGLGGDLLLSGVVDVL
AVERGGALVVDYKTNRLEPGVDRAAYIDTAYGVQRDAYALAALRGGARRVTVAYVLLDRP
AEPITFDVTSEGAADLETRLRVAAADLLAGRYEVTAAPHRALCQTCPGARGLCSYPRELL
LRDTPGSVVG
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaggtgttccgccgggcgccgggccgaactcgcggcgcgtgacgcggtcgcggtc
ctgtcagcgaacttccgcagcgcgcccgagatcctcgacgcggtcaacgccgtgttcgcc
ccgcggttcggcgagacgttcacgccgctgcggccggggcgtgagctcccgcgctccgag
gatcccgtcatcgagctgctgctcaccgacgccgccgcatgggacgacgagaccgatccc
gcgcgccccgatctcggcgcgctgccgggcgacaagcgctggcgtcacgccgaggcgcgg
ctgctcgcccagcgcatcgcggacctggtggcggccggcgagccgcccgaggacatcgtc
gtgctcgtccgcgcgctcggcgacctgcccgcgtacgagcgcgcgctggaggagcaggga
ctctccgtcctggccagtggtggccgcgggtattggggtcggcaggtggtccgcgatctc
tgcggctggctcgccgcgctggccaacccgcgtgatgaggccgcgctgttcggcgtcctc
gcgtcgccgctcgtcgggctgtcgtccgacgggctgctgcacgtcgcgcaggcggggcgc
ggccgggtgtgggagacgatccgcggcggcgacgccgacgcgcgcctcgctgacgacgac
cgcgaccgcctgcgccggttcgcggcgcggttcgcccacgagcggacgctcgccggacgg
ttggcgatcgacgagctgctgcgccggatcatcgaggccgccgactacgacctgcacgtc
ctgcggctccccggcggccagcggcgactggccaacgtgcacaagctgctgcggctcgcc
gccgcccagcagggcgcaggtgccgacctgcgcgcgttcgtcgaccatgccaccgccgaa
ctggacgccgacgcgcgagagggggacgcgcccgtcgagttgtcgggcagccgcgcgatc
cgcctcatgaccatccacgcggcgaaaggcctggagttcgggatcgtgtgcgtcgccgac
ctggggcgcgagctgcggcgcaccgtcggcgccgtgctcgtggacggggatcgggtcggc
ctgcggctgcggaccttcgacgggacgtcggagcccgcgctcgcgcacgatgcgatcaag
caggacatcgtcgccgccgagcgcgccgaggaggagcgcatcggctacgtcgcgctgacc
cgcgccgagcggcgcctcatcctcagcgggggagtgaaggtcgacgattggcccaacgcg
cacaagccgaacgcctcgctgctgagctggctcggccccgcgctggtccccggcatccag
tccgggctgcttgacgacgccgagcccgtgcgcgacgtgcgggtcgcgggcgacggcccg
cgtcgcccgctcgtgcgttgcgcgctgaatcgcccggcgaccgtggggcgggtgttgcgg
cccgagcacgccgcccccgccgggcgcgaactgccggccgcgcgcccgctcggcatgcgc
ccacccgcagcggccgcgcccgtgaccgcgccggtccccgcccgcgtgtcgttcacccag
ctggccgatcaccgggcctgtgggtatcgctactacctgcggcgcatcttgcggctccct
gaagagcgcgccgacgcggtcgcgcgtgacgccgcggcgcaggagccggcaggactcgaa
gcgcggctgcgcggctccatcgcccacgtgctgctcgaggagctcgaccccgcgcggccc
ggggtgtgggcgccgggtggcgatcccgcagcgcgcgcggcgctcgtccgggatatggcc
gcggggtgggacgccgcactcgacgacgagcaggcgcgtgagatcgccgggctcgtcgcc
gggttcgcagcggcgccgctggccgcccggctggcgaaggcccgcgacgtccatcgcgag
cacccgttcgccgtcggcctcggcggcgacctgctgctcagcggggtggtcgacgtgctc
gcggtcgagcgcggcggcgcgctggtcgtggactacaagacgaaccgcctggagcccggc
gtcgaccgggccgcttacatcgacacggcgtacggcgtgcagcgcgacgcctacgcgctg
gccgcactgcgcggcggtgcgcgccgggtgaccgtcgcgtacgtgctgctcgaccggccg
gcggagccgatcaccttcgatgtgacctccgagggcgccgccgacctcgagacgcgtctg
cgggtcgcggcggccgatctgctcgccggccgctacgaggtcacggcagcaccgcaccgc
gcgctgtgccagacctgccccggcgcgcgcggactgtgctcgtacccgcgtgagctgttg
ttgcgcgacacgcccggctcagtcgtcggctga
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