Svornostia abyssi: LRS13_21855
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Entry
LRS13_21855 CDS
T09859
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj00300
Lysine biosynthesis
pbaj00470
D-Amino acid metabolism
pbaj01100
Metabolic pathways
pbaj01110
Biosynthesis of secondary metabolites
pbaj01120
Microbial metabolism in diverse environments
pbaj01230
Biosynthesis of amino acids
Module
pbaj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
pbaj_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LRS13_21855 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LRS13_21855 (lysA)
Enzymes [BR:
pbaj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LRS13_21855 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UUY03285
UniProt:
A0ABY5PF43
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Position
complement(4355268..4356527)
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AA seq
419 aa
AA seq
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MATAQRLSAAWPADSRLIDDRRLEIGGVDALALAREFGTPAYVVAEDDLRSRARQYLSAF
RTHAPDAEIHFASKANPCTAVLRVFAEEGLGVDVASGGELHVALKAGFEPAKIILHGNAK
SEAELRTAIDAGVGYIVIDNFADLERVIALAGDRVQPVLLRVTPDVRGETHDKISTGQAD
SKFGLSLRDASAAIERAAAAPNLRLDGLHLHIGSQLLELGPWRDAVEAIAPLGDFPVVNL
GGGLGVAYTDAEDPPSIEVYAAAKVAAARELLGDHVRIIDEPGRSLVANAGVTLYTVESV
KRNVSTWVGVDGGMSDNLRPMLYGARYEAEIADRFGGTTPSRITGKHCESGDVIVAEAQL
DEPKPGDVVVTPATGAYGYAMSNNYNGIPRPPVVFVKDGDARVVVRRETFEDLTSRDID
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcgcaacgcctctccgccgcctggccggccgacagccggctgatcgacgac
cgccgcctcgagatcggcggggtcgacgcccttgcgcttgcgcgcgagttcggcacccct
gcgtacgtcgtcgccgaggacgacctgcggtcccgcgcgcggcagtacctgtccgcgttt
cgcacccacgcgcccgacgcggagatccacttcgccagcaaggcgaacccgtgcaccgcg
gtgctccgcgtgttcgccgaggagggcctgggcgtcgacgtcgcctcgggcggggagctg
cacgtcgcgctgaaggcggggttcgaaccggcgaagatcatcctgcacggcaacgcgaag
tccgaggccgagctgcgcacggcgatcgacgcgggcgtgggctacatcgtcatcgacaac
ttcgccgacctcgagcgggtcatcgcgctcgccggggaccgggtccagcccgtcctgctg
cgcgtcacgcccgacgtgcgcggcgagacgcacgacaagatctccaccggccaggccgac
tcgaagttcggcctctcactccgtgatgcgtcggccgcgatcgagcgcgccgccgcggcg
ccgaacctccgcctcgacgggctgcacctgcacatcgggtcgcagttgctcgagctcggc
ccgtggcgcgacgcggtcgaggcgatcgccccgctcggcgacttccccgtcgtgaacctc
ggcggcgggctcggcgtggcgtacaccgacgcggaggacccgccgagcatcgaggtctac
gccgccgcgaaggtggctgcggcgcgcgagctgctgggcgatcacgtgcggatcatcgac
gagccgggccggtcgctcgtggcgaacgcgggcgtcaccctgtacaccgtcgaatccgtg
aaacgcaacgtctcgacgtgggtcggcgtggacggcggcatgagcgacaacctgcgcccc
atgctgtacggcgcgcgctacgaagcggagatcgccgaccgcttcggcgggacgacgccc
agcaggatcacgggcaagcactgcgaatccggcgacgtgatcgtcgctgaggcccagctc
gacgagccgaagcccggtgacgtcgtcgtcacgcccgccaccggcgcgtacggctacgcc
atgagtaacaactacaacggcattccgcgcccgcctgtcgtcttcgtcaaggacggggac
gcgcgggtcgtggtgcgccgggagaccttcgaggacctgacgagccgtgacatcgactga
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