Svornostia abyssi: LRS13_21950
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Entry
LRS13_21950 CDS
T09859
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LRS13_21950 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbaj03400
]
LRS13_21950 (xseA)
Enzymes [BR:
pbaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LRS13_21950 (xseA)
DNA repair and recombination proteins [BR:
pbaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LRS13_21950 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
DHQ_synthase
Motif
Other DBs
NCBI-ProteinID:
UUY06358
UniProt:
A0ABY5PNX5
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All DBs
Position
4371475..4372419
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AA seq
314 aa
AA seq
DB search
MRRVLDAEGLLTPQKTLARRALPGTIGVVTGEGGKARDDILAGLHRRGWAGRLVWAFAPV
QDRHAAPAITRALTDLAASGAVDVIIVARGGGSVTDLLAFSDETLCRTVALLRVPVIASV
GHHTDRTLIDDVAACACSTPTHAAEQAVPVHVGEARARMAGVAVRLQRHGHRAVVDRARE
LVRLSRAPAEHVARHRASLHQSLRELRAAGRRRVAREMGAGAAAARALDRRARAAAGADR
QRRARELEHLASALAAHDPERTLARGFALVEDRDGGLVTSAEQARGAGALSLRFADGKVG
AAPDESIDPRCDDA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
ctgcgccgggtcctcgacgccgaagggctgctcaccccgcagaagacgctcgcgcgccgg
gcgctgccgggcaccatcggcgtcgtcaccggcgagggcggcaaggcgcgcgacgacatc
ctcgccgggctgcaccggcgtggctgggccgggcgcctcgtgtgggccttcgcccccgtg
caggaccgccacgccgcgcccgccatcacccgcgcgctcaccgacctcgcggcgtccggc
gcggtcgacgtgatcatcgtcgcgcgcggcggcggctcggtcaccgacctgctggcgttc
agcgacgagacgctgtgccggacggtcgcgctgctgcgggtgccggtcatcgcgtcggtc
ggccatcacaccgaccgcaccctcatcgacgacgtcgcggcatgcgcgtgctcgacgccg
acccatgcggccgagcaggccgtcccggtgcacgtcggcgaggcccgcgcccgcatggcc
ggtgtggccgtgcgactgcagcgccacggccaccgcgccgtcgtggaccgggcgcgggaa
ctcgtccgcttgtcccgtgcgccggccgagcacgtggcccgccaccgtgcgtcgctgcac
cagtcgctgcgcgagctgcgcgctgcagggcggcgccgcgtcgcgcgggagatgggcgcc
ggcgcagccgccgcccgcgcactcgaccggcgcgcccgggccgccgcgggcgccgatcgg
caacgccgcgcgcgcgagctcgaacacctcgcctcagcgctcgccgcgcacgaccccgag
cgcacgctggcgcgcggattcgccctcgtcgaggaccgcgacggcggcctcgtgacgagc
gcggagcaggcacgtggcgcgggcgcgctctcgctgcggttcgccgacggcaaggtcggc
gccgcacccgacgagtcgatcgacccgcgctgcgatgatgcctga
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