Svornostia abyssi: LRS13_25080
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Entry
LRS13_25080 CDS
T09859
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pbaj
Svornostia abyssi
Pathway
pbaj00061
Fatty acid biosynthesis
pbaj00071
Fatty acid degradation
pbaj01100
Metabolic pathways
pbaj01212
Fatty acid metabolism
pbaj02024
Quorum sensing
pbaj04146
Peroxisome
Module
pbaj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pbaj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LRS13_25080
00071 Fatty acid degradation
LRS13_25080
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LRS13_25080
09145 Cellular community - prokaryotes
02024 Quorum sensing
LRS13_25080
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pbaj01004
]
LRS13_25080
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pbaj04147
]
LRS13_25080
Enzymes [BR:
pbaj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LRS13_25080
Lipid biosynthesis proteins [BR:
pbaj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LRS13_25080
Exosome [BR:
pbaj04147
]
Exosomal proteins
Exosomal proteins of breast milk
LRS13_25080
Exosomal proteins of breast cancer cells
LRS13_25080
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Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
KhtT_N
Motif
Other DBs
NCBI-ProteinID:
UUY03888
UniProt:
A0ABY5PGU6
LinkDB
All DBs
Position
complement(4983060..4984865)
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AA seq
601 aa
AA seq
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MATAQSTSSTTTAGRTLAGLALSPARPAAVALRYPEGEEWKEETYAALKIAVEGIGRGLI
ALGVEPGDRVGILATTRYEWTLADLAILAIGAVTVPVYQTNSPEECQYVIEHSGMKVLFC
EDRDQLDKIATVRDQCPDLEQLVVFESTEDDHALTLDQLRAKGDDTPTERVHERAAAVTS
DDLATIVYTSGTTGPPKGCMLTHGNVTADVAMTQQRVPADGHEVYYVFLPLAHALTRIVQ
FLALNAGSQLVYWRRDPTRLLDEIAEVSPTHLPSVPRLFEKIYTAATSKVAEAGGAKAAL
FGRAVATGKRVVEAERAGRSVSPLLKLQHRLGDKLVLSKVKALFGENIELCLTGAAPIEP
DVMNFFHGAGVWVLEGYGMTETSAVATVNTVAEHKLGTVGKPIPGCEIKIAEDGEVLMRG
PNIFTGYWNNPEATAKDLQDGWLHSGDLGEIDADGYLKITGRKKDLIITSSGKNVAPSNI
ENAIRQHRWVSQAVVFGDRKPYLTAIVTLDPDEAPALAELVGARGATVEQLATNDGVRAE
IQKVVDEANLRFARIEQVKKFAILPRDLSQEDNELTPTLKVKRNVVYSQHAATFEELYGG
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcccagtccacgtcctccaccaccaccgcgggccgcaccctcgcgggtctc
gcgctctcgccggcccgcccggcggccgtcgcgctgcgctacccggagggcgaggagtgg
aaggaggagacgtacgccgcgctgaagatcgccgtcgaggggatcgggcggggactcatc
gcgctgggcgtcgagccgggtgaccgggtcggcatcctcgcgacgacgcgctacgagtgg
acgctggccgacctcgcgatcctcgcgatcggcgccgtcacggtgcccgtctaccagacg
aactcgccggaggagtgccagtacgtcatcgagcactccggcatgaaggtcctgttctgc
gaggaccgcgatcagctcgacaagatcgcgaccgtgcgcgaccagtgcccggacctcgag
cagctcgtcgtcttcgagagcaccgaggacgaccacgcgctcacactcgatcagctgcgc
gccaagggcgacgacacgccgaccgagcgggtgcacgagcgcgccgcggcggtgacgagc
gacgacctcgccaccatcgtctacacgtcgggcacgaccggcccgccgaagggctgcatg
ctcacccacggcaacgtcaccgccgacgtcgcgatgacccagcagcgcgtgccggccgac
gggcacgaggtctactacgtgttcctgccgctggcgcacgcgctcacccgcatcgtgcag
ttcctcgcgctgaacgccgggtcgcagctcgtctactggcggcgcgaccccacgcgcctg
ctcgacgagatcgccgaggtgtccccgacgcacctgccgtcggtgccgcgtctgttcgag
aagatctacaccgccgcgacgtcgaaggtcgccgaggccggcggggcgaaggccgcgctg
ttcggccgggcggtcgcgacgggcaagcgggtggtcgaggccgagcgcgccgggcggtcc
gtgagcccgctgctgaagctgcagcaccgcctgggcgacaagctcgtgctgagcaaggtc
aaggcgttgttcggcgagaacatcgagctgtgcctgaccggcgcggcgccgatcgagccc
gacgtcatgaacttcttccacggcgccggcgtgtgggtgctcgagggctacggcatgacg
gagacgtcggcggtcgcgacggtgaacacggtcgccgagcacaaactcggcacggtcggc
aagccgatccccggctgtgagatcaagatcgccgaggacggcgaggtcctcatgcgcggc
ccgaacatcttcaccgggtactggaacaacccggaggcgacggcgaaggacctgcaggac
ggctggctgcactccggcgacctcggggagatcgacgccgacggctacctgaagatcacg
ggccgcaagaaggacctgatcatcacgtcgagcggcaagaacgtcgccccgtcgaacatc
gagaacgcgatccgccagcaccgctgggtctctcaggccgtggtgttcggcgaccgcaag
ccgtacctcacggcgatcgtcacgctcgaccccgacgaggcgccggcactcgccgagctc
gtgggtgctaggggcgccacggtcgagcagctcgcgacgaacgacggggtgcgtgccgag
atccagaaggtcgtcgacgaggcgaacctccggttcgcgcgcatcgagcaggtcaagaag
ttcgcgatcctcccgcgcgacctgtcgcaggaggacaacgagctgacgccgacgctgaag
gtcaagcgcaacgtcgtctactcccagcacgcggcgacgttcgaggagctgtacggcggc
gcgtga
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