Candidatus Bodocaedibacter vickermanii: CPBP_00009
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Entry
CPBP_00009 CDS
T10196
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
Organism
pbal Candidatus Bodocaedibacter vickermanii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
LSDAT_prok
AAA_22
Utp25_C
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QOL19262
UniProt:
A0A7L9RRS7
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All DBs
Position
complement(10415..12046)
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AA seq
543 aa
AA seq
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MNDTQNPTLAQTPFDTLGVSAHLVAALQKLNITTATPIQKQSIPLLLEGKDILASAQTGT
GKTIAYLLPILQGLLSSNDDSTALVLVPTRELAVQVKDSILDVLGRGSSIFTAVLIGGEP
MARQFAQLKRRPRIVVATPGRLNDHLQRGSVKLNTTRYLVLDETDRMLDMGFADQLEAIV
DCLPKKRQTMMFSATMPGNMMKLASNYLNDPQRIAVGVENQAVAKIKQDMVRTSQGNKLP
LLLKELDQREGSVIIFVKTKMGAEQLASQLRDENHSVDAIHGDLKQNHRTKVIQAFRNRK
SRIMVATDVAARGLDVPHIQHVINYDLPQCPEDYIHRIGRTGRAGAEGFALCFVAPNETG
KWNAIHRLMNPGEKGASSGSSDDQFPRHQERRRSGNGPFGGKPRSASGGSRGAFGAPKGD
GGFDGKKRFGKPRFPRDNADAAGGRSFDKPRFPRDNADASGNKSFDKPRFPRDNADASGN
RSFDKPRFPRDNADAPGNRSFDKPRFKSASGDFKSGKPSSIQDSVKGGIKKFFSKPFGSK
KRG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgatacacaaaaccctaccctagcacaaacaccctttgatacattaggcgttagt
gcacacttagtagctgcactacaaaaacttaacatcactacagctacacccattcaaaaa
caatctatccctttacttttagaaggtaaggatattttagcatctgcccaaactgggaca
ggtaaaacgattgcttatttacttccgattttgcaaggcttgttgtcatcaaacgatgac
tcaacagcattagttctagttccaactcgcgaattagccgtgcaagttaaagacagcatt
ttagacgtattaggtcgcggatcttcgatttttactgccgtacttatcggtggagaacct
atggctcgtcaatttgcgcaattgaaacgtcgcccacgcatcgttgttgcaacacctggt
cgcttaaacgatcacttgcaacgcggcagtgtaaaactaaatacgacacgctacctagta
ttagatgaaacagaccgtatgttggacatggggtttgcggatcaactagaggcgatcgtt
gattgcttacctaaaaagcgtcaaactatgatgttctcggcaactatgccaggcaacatg
atgaaactcgctagcaactacttgaacgacccacaacgcattgccgttggagttgaaaac
caagccgttgcaaaaattaaacaagacatggtacgcacgtctcaaggcaataaattacct
ttattgttaaaagaattagaccaacgcgaaggttctgttattattttcgtaaaaacgaaa
atgggcgcagaacaacttgcaagtcaattgcgcgatgaaaaccacagtgttgatgccatc
catggcgatctaaagcaaaaccatcgtacaaaagtaattcaggctttccgtaatcgtaaa
agccgcattatggttgcaaccgatgttgccgcacgtggattagatgtgcctcacattcaa
cacgtgatcaactatgacttaccacaatgcccagaagattacattcaccgcattggtcgt
acgggtcgtgctggtgctgaaggctttgctttgtgctttgttgccccaaatgaaactggt
aaatggaatgcgattcatcgcttaatgaacccaggtgaaaaaggcgcgtctagtggatca
agcgatgatcaattcccacgtcatcaagaacgtcgtcgtagcggtaatggtccatttggt
ggaaaaccacgctctgcaagcggtggttcacgcggcgcatttggagctcctaaaggcgac
ggtggattcgatggaaaaaaacgctttggcaagcctcgttttcctcgcgataacgctgat
gctgcgggtggtagaagctttgataagcctcgcttccctcgtgataatgcagacgcatct
ggtaacaaaagctttgataagcctcgtttccctcgtgataacgctgatgcatcaggcaac
agaagctttgataagcctcgtttccctcgcgataacgctgatgcaccaggcaatagaagc
tttgataagcctcgtttcaaatcagcgtctggtgatttcaaatctggcaaaccttcgtct
atccaagatagcgttaaaggcggcataaagaagtttttctcaaaaccttttggcagcaaa
aaacgcggctaa
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