Candidatus Bodocaedibacter vickermanii: CPBP_00111
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Entry
CPBP_00111 CDS
T10196
Symbol
xerD
Name
(GenBank) Tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pbal Candidatus Bodocaedibacter vickermanii
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbal03036
]
CPBP_00111 (xerD)
Chromosome and associated proteins [BR:
pbal03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CPBP_00111 (xerD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
PWP3A-B_C
DUF7138
Motif
Other DBs
NCBI-ProteinID:
QOL19359
UniProt:
A0A7L9RS30
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All DBs
Position
complement(97296..98228)
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AA seq
310 aa
AA seq
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MSKIKNNLAPYPEVEQFIEMLASEIGASPNTISAYLSDISHFVDYLDKNSLHLLPPSKTV
MMEYISSLQDLGLSDRTKARRLSALRSLYAFFVREKKIESNPTKLIDRPKQGRRLPKFLT
ESETEALINAAYSSNHPDCARRVVFIELLYATGMRISELIQIKLSDIQWLDECLLITGKG
NKQRIVPFNQSTKSALIHYIQNSQPSSKSGWLFPSSNPTSHLTRQRFFQIIKELAVDAGL
DPLKVSPHVIRHAFATHLLNHGANLLNVQKLLGHSDIATTEIYTHIMTDKLKETVFNHHP
LSTRGAHRTH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagataaaaaataatttggctccctatcctgaggttgaacagttcattgaaatg
ttagcctcagagatcggggctagtccgaatacaatctcagcttacctcagcgatattagt
cattttgtcgattatttagacaaaaactctttgcatcttttacctccctcaaaaactgta
atgatggagtatatctcttcattacaggaccttggattatcggatcgcactaaagcccgc
agattgtctgctctcagatccttgtatgccttttttgttagggagaaaaagattgaatcc
aatccaacaaagcttatcgaccgacctaagcaaggtcgaaggcttcctaagtttctaaca
gaatctgaaactgaggctttgataaatgctgcctacagctctaatcaccctgactgcgcc
agaagggttgtattcattgagcttttgtatgctacaggcatgcgaatttctgaattaatt
cagataaaactatccgatattcaatggttggatgaatgtctattaattacgggaaaaggc
aacaaacaacgtattgttcccttcaatcaatccactaaatctgcgcttattcattacatt
caaaattcacagccgtcatctaagtctgggtggttgtttccgtcatccaatccaacaagt
catttaacgcgacaacgtttttttcagattatcaaagaactagctgttgatgcagggctt
gatccactaaaagtatctccgcatgtgattcgacatgcctttgcaacacacttattaaat
catggtgcaaacctgcttaatgttcaaaaattactagggcattctgacattgccaccaca
gaaatttatacacacattatgacagacaagctgaaagaaaccgtatttaaccatcaccct
ttaagtaccaggggcgcccaccgaactcattag
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