Candidatus Bodocaedibacter vickermanii: CPBP_00144
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Entry
CPBP_00144 CDS
T10196
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pbal Candidatus Bodocaedibacter vickermanii
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbal03032
]
CPBP_00144 (gyrA)
03400 DNA repair and recombination proteins [BR:
pbal03400
]
CPBP_00144 (gyrA)
Enzymes [BR:
pbal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CPBP_00144 (gyrA)
DNA replication proteins [BR:
pbal03032
]
Prokaryotic type
DNA Topoisomerases
CPBP_00144 (gyrA)
DNA repair and recombination proteins [BR:
pbal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPBP_00144 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
QOL19392
UniProt:
A0A7L9RS60
LinkDB
All DBs
Position
149842..152547
Genome browser
AA seq
901 aa
AA seq
DB search
MSDKKNSVLDTDIRAVSIEHEMKSSYLDYAMSVIVGRALPDIRDGLKPVHRRILFSMKQD
GYDYNKPFKKSAYIVGGVMARFHPHGDSAIYHSMVRMAQSFSLRVPLIQGQGNFGSMDGD
PPASFRYTEARMSKAAHAMTEDIDKDTVNFRPNYDETLLEPSVLPARFPNLLVNGAEGIA
VGMATSVPTHNLSEVIDACCAFVDNRDITIEELMEFVKGPDFPTGAIILGRSNILQAYRT
GRGSIIVRGRTEIEEIRKGRMAIIISEIPYQVNKAKMVERIAETVKLKIIEGISEIRDES
NRTGVRVVVELKKDASPDVVLNQLFKFTPLQTSISFNVLALYNNRPELLNLQQIIKAFVE
FREEVITRRSRFLLRKAREKANLLVGLGVAVANIDEVIRIIRAASDPKTAKENLLAREWD
TKDIAPFIQLVTGEEVLLKTYQMSEEQAKAILDLRLHRLTGLEREKILDDLKEVVAEIER
LLDILSDKAVLYALLKQEMIEVKDQFGTPRKTEIQEGEFEHDIEDLIEREDMVVTVTMSG
YIRRSSLLLYRAQRRGGKGRSGMATRDEDAVQDLFVANTHTPLLFFTTHGQCYKLKVYRL
PEGTLQSRGKALVNLLPLEAGERIATIMPMPEDEAEWANMFIMFATNRGNVRRNRLSDFT
QIRSSGKKAIRLDEGENLISVQPCYDTQDVLLASRDGKSIRFSVTDIRVFAGRDSNGVRA
IRLAGENEVVSMSLLNSIDFTIEERNAYLKMRRLDDDSVAEDDDESTAEVTLTEERFKEL
QAKEEYILTLTDKGYGKRTSSFEYRVTHRGGQGLTNIGLSAKNGKVISSFPVGHGDDIVL
MSDASTTIRCPVEGVRICGRTSQGVIVIRLAENEKVISTTRLDESKIVQDDAIDIEVGIE
E
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgataaaaagaattcggtattggatacggatattcgtgctgtatctattgaacat
gaaatgaaaagttcctatttagattatgccatgagcgtaatcgtgggacgtgccttacct
gacatacgtgacgggctgaaaccggttcatcggcgtattttattttcgatgaaacaagat
gggtatgattataacaaaccctttaaaaagtcagcctatatcgtcggaggcgtgatggca
aggtttcacccgcatggtgactctgctatttaccattcgatggtgcgtatggctcagtcg
ttctcattaagagtaccattgattcaggggcaaggtaactttggttcgatggatggtgac
ccacctgcatcattccgttatacggaagctcgtatgtctaaagcagcacatgcgatgacc
gaggatattgataaagacaccgtcaatttccgtccaaactatgacgaaacattattagaa
ccctctgttttgccagcgcgatttcccaacttattggtgaatggtgctgaaggtattgct
gtgggtatggcgaccagtgttccaacgcataacttaagcgaagtaattgatgcatgctgt
gcgtttgtggataaccgggacattaccattgaagagttaatggagtttgtgaaggggcct
gattttccaacaggtgcgattattctgggacgatccaatattctgcaggcataccgtaca
ggtaggggcagcattattgttcgtgggcgtacggagattgaggaaattcgcaaaggccgt
atggcgattattatcagcgaaattccgtatcaagtgaacaaagcaaaaatggtcgagcgt
attgcggaaactgttaaactaaagattattgaaggcatttctgaaattcgtgacgaatcc
aaccgtactggtgtgcgcgttgtcgttgaattgaaaaaagatgcatcacctgatgttgtg
ttgaaccagctgtttaaattcacaccgttgcaaaccagcattagctttaacgtattggcg
ttgtataacaaccgaccagaattgttaaacttgcaacagattattaaagcctttgtggaa
ttccgtgaagaagtgatcacgcgtcgttctaggttcttgctgcgtaaggctcgtgaaaag
gctaacttattagtaggtctgggtgttgccgttgcaaacatcgacgaagttatccgaatc
attcgtgcagcgtctgaccccaaaacagcgaaagaaaacttgctggctcgtgagtgggat
acaaaagacattgcaccgttcattcaattagtaacgggcgaagaggtcttgcttaagacg
tatcagatgtctgaagaacaagccaaggcaattttagatttgcgtttacaccgtttaaca
ggattagaacgcgaaaaaatattagacgatttgaaagaggttgttgctgaaattgaacgc
ctgttagacattttgtcggataaagctgttttatatgcgttgctaaagcaggaaatgatc
gaagttaaagatcaattcggaactccacgcaagactgagattcaagagggcgaatttgaa
catgacatcgaagacctgattgaacgcgaagatatggttgtgacggttacgatgagtgga
tacattcgtcgttcatcattgttgttatatcgtgcgcaacgtcgcggtggaaaaggtcga
tctggtatggcgacccgtgatgaagatgctgtacaagatttgtttgttgcaaatacgcat
acaccattgttgttctttacgacccatggtcaatgttacaaattaaaagtgtaccgtttg
ccagaaggtacgttgcaatctcggggtaaagccttagtgaatttgctgccattggaagca
ggtgagcgtattgcgaccattatgccaatgccagaggatgaagcagaatgggcaaacatg
ttcattatgtttgcgacaaaccgtggtaatgttcgacgcaaccgtttgagtgattttact
caaattagatcatcgggtaaaaaagcgattcgtttagatgaaggtgaaaacttaatttct
gttcagccctgttatgatactcaagatgtattattggcatcgcgtgatggtaaatcgatt
cgattctctgttaccgacattcgtgtatttgctggacgtgattccaatggtgttagagcg
atccgcttggcaggtgaaaatgaagttgtgtcaatgtcattattaaacagcattgatttc
acaatcgaagagcgcaatgcatatttgaagatgcgtcgtttggatgatgattccgttgct
gaagatgatgacgaatcaacagcagaagtcaccctgaccgaagagcgttttaaagaactg
caagccaaggaagagtatatcttaacccttacagataaaggctatggtaaacgtacgtcg
tcttttgaatatcgcgtaacgcaccgtggcgggcaggggcttacaaacattggcttgtcg
gctaaaaacggtaaagtgattagctcattccctgtaggtcatggagatgatatcgttttg
atgtcggatgcaagtacaacgattcgttgccctgttgaaggtgttcgtatttgtggacga
acttcccaaggtgtaatcgtaattcgattggctgaaaatgaaaaagtcatatcaacaacg
cgtttggacgaatcaaaaattgtccaagatgacgcgattgatatagaagtaggtattgaa
gagtaa
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