Candidatus Bodocaedibacter vickermanii: CPBP_00225
Help
Entry
CPBP_00225 CDS
T10196
Symbol
hisS
Name
(GenBank) Histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
pbal Candidatus Bodocaedibacter vickermanii
Pathway
pbal00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CPBP_00225 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbal01007
]
CPBP_00225 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbal03016
]
CPBP_00225 (hisS)
Enzymes [BR:
pbal01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
CPBP_00225 (hisS)
Amino acid related enzymes [BR:
pbal01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CPBP_00225 (hisS)
Transfer RNA biogenesis [BR:
pbal03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CPBP_00225 (hisS)
Prokaryotic type
CPBP_00225 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
HGTP_anticodon
tRNA-synt_2d
Rad33
Motif
Other DBs
NCBI-ProteinID:
QOL19469
UniProt:
A0A7L9RSE7
LinkDB
All DBs
Position
237142..238392
Genome browser
AA seq
416 aa
AA seq
DB search
MLQPVRGTKDLIGTEATLYRKVVDTAYAVALRYNFQEIQTPLFEFSQVFQRTLGETSDVV
SKEMYTFEDRGGESLTLRPEGTAPVVRAIISNGLTQSLPLKLFYSGAMFRYERPQKGRQR
QFHQIGAELIGPKTPLADAEMIALGYQVLKTLNLHTDVILNLNTLGDVESRTAYRAALVN
YLQQYKDALSKDSQDRLERNPLRILDSKDENDQKIIENAPLFQDYLNDESKAYFNQVQAY
LNALNIPYIHNQKLVRGLDYYCHTAFEFVTTSLGAQGTVLAGGRYDGLMKQMGGPDASGI
GWGAGIERLCLMLQEQDTVIKTANLITIVPTSEAEESTAFQVAQTLRAAGLHIDIGYSGN
MSKRLKKASQNNSIAAIIIGADEIASKAAQVKFLNENRQENISLSQLADFLNTNLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgttacaacccgttcgtggtacaaaagatttaataggcaccgaagcaaccctgtatcgc
aaggttgttgatactgcatatgctgtggcattacggtataattttcaagaaattcaaaca
cccttatttgaattcagccaagtgtttcaaagaactcttggggaaacctctgacgtcgtt
tcaaaagaaatgtatacgtttgaagatcgaggcggtgaatcattaactctacgccccgaa
ggtactgcacctgttgttcgtgctattatttccaatggtctcactcaaagcttgccgtta
aaattattctattctggtgccatgttcaggtacgaacgccctcaaaaagggcgccaacgg
caatttcaccaaatcggtgctgaacttattggacccaaaactccgctagctgatgcagaa
atgattgcattgggctatcaggtattaaaaacattaaacctacacacggatgttatttta
aacctgaatactcttggtgatgtggaaagccgtacagcctacagagctgcattggttaac
tatttacaacagtataaagatgccttgtccaaagacagccaagatcgtttagagcgcaat
ccattgcgcattctggattctaaagatgaaaatgatcaaaagattattgaaaatgctccg
ttgtttcaagactatttaaatgatgaatccaaagcgtacttcaatcaagttcaagcctat
ttaaacgcattaaacatcccctatattcacaatcaaaaactcgtacgtgggttagattat
tactgccacactgcctttgagtttgtaacgacatcattaggcgcgcaaggcaccgtgctt
gccggtggacggtatgatggactgatgaaacaaatggggggacccgatgcctcaggcatt
ggctggggtgctggaattgaacgcttgtgcttgatgttacaagaacaagatactgttata
aaaacagcaaacttaataactatagtccccacaagtgaagcagaagaatccactgcgttt
caagttgcccaaacgttacgtgctgccgggttacatattgatattggatacagcggtaac
atgtcgaaacgactcaaaaaagcctctcaaaacaatagcattgcagccatcattattggc
gctgatgaaattgcatctaaagcggctcaggttaaattcttaaatgaaaaccgccaagaa
aatatttcgttaagccaattggctgattttttaaacacaaacctatcttaa
DBGET
integrated database retrieval system
