Candidatus Bodocaedibacter vickermanii: CPBP_00412
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Entry
CPBP_00412 CDS
T10196
Symbol
hupA
Name
(GenBank) DNA-binding protein HU 1
KO
K03530
DNA-binding protein HU-beta
Organism
pbal Candidatus Bodocaedibacter vickermanii
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbal03032
]
CPBP_00412 (hupA)
03036 Chromosome and associated proteins [BR:
pbal03036
]
CPBP_00412 (hupA)
03400 DNA repair and recombination proteins [BR:
pbal03400
]
CPBP_00412 (hupA)
DNA replication proteins [BR:
pbal03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CPBP_00412 (hupA)
Chromosome and associated proteins [BR:
pbal03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CPBP_00412 (hupA)
DNA repair and recombination proteins [BR:
pbal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CPBP_00412 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_1
RIP_P131-like
Motif
Other DBs
NCBI-ProteinID:
QOL19648
UniProt:
A0A7L9RTF6
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All DBs
Position
444764..445042
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AA seq
92 aa
AA seq
DB search
MNTTDLIDAIAKQTGMTKVDSKNVLHGIFDTISQTLKSGDEVRVSGFGTFVGKKQEARQG
RNPQTGAAISIPASIQAKFRPAKELKETLNGK
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaactgatttaatcgacgcgatcgcaaagcaaactggaatgacaaaagttgat
tccaagaatgtattgcatggaatttttgatacaattagccaaactttaaaaagtggtgat
gaagttcgcgtaagcggattcggcacatttgttggtaaaaagcaagaggctcgtcaaggt
cgcaacccacaaacaggtgcggcaattagcatccctgcatctatccaagcaaaattccgc
ccagcaaaggaattaaaagaaacattaaacggcaaataa
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