Candidatus Bodocaedibacter vickermanii: CPBP_00416
Help
Entry
CPBP_00416 CDS
T10196
Symbol
thrS
Name
(GenBank) Threonine--tRNA ligase
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
pbal Candidatus Bodocaedibacter vickermanii
Pathway
pbal00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CPBP_00416 (thrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbal01007
]
CPBP_00416 (thrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbal03016
]
CPBP_00416 (thrS)
Enzymes [BR:
pbal01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
CPBP_00416 (thrS)
Amino acid related enzymes [BR:
pbal01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CPBP_00416 (thrS)
Transfer RNA biogenesis [BR:
pbal03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CPBP_00416 (thrS)
Prokaryotic type
CPBP_00416 (thrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
tRNA_SAD
TGS
Motif
Other DBs
NCBI-ProteinID:
QOL19652
UniProt:
A0A7L9RSX0
LinkDB
All DBs
Position
complement(446654..448561)
Genome browser
AA seq
635 aa
AA seq
DB search
MQIEFPDGRVQQIEAGITGSDIAKGISPSLEKKAVAISLNGELKDLNVPLTTGGKFRIIT
KDDPEGLEILRHDTAHVLAETIKELYPDAQITIGPVIENGFFYDIYRDKPFTTDDFDGIE
QRMREIVDRNEPIQREEWDRDEAIKYFESIGETFKAEIIRDIPAGQIISLYRQGKFLDLC
RGPHLPSTGRLGKAFKLMKLAGAYWRGDSKNPMLQRIYGTAWASEEQLKQHLHMLEEAEK
RDHRKLGREMDLFHMQDEAPGSVFWHPKGWTIYRELQNYIRRRISKVGYVEVNTPIMVDR
ILWEASGHWEKFHENMFISETEDKLFALKPMNCPCHVQIFRQGIKSYRDLPLRMAEFGCC
HRNEPSGALHGLMRVRSFVQDDAHIFCQEDDITSETKAFCELLMSVYKDFGFTDVRIKFS
DRPAKRAGTDATWDKAEGALMDAVKASGLEYTLNPGEGAFYGPKLEFVLRDAIGRDWQCG
TLQVDFVLPERLDANYIGSDGEKHRPVMLHRAILGSIERFFGILIENYAGKLPLWLAPTQ
VVIATVVDSANEYAENICNQLKEAGLRVGTDLRNEKISYKVRDLSVQKIQYIAVVGAKEA
EEQTISLRQLGSQDQTVMTLKEFVAMMKENAAPPA
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcagatagagtttcccgatgggcgtgtacagcaaatagaagctggaatcacaggttca
gatatagcgaaaggcattagtccatcgcttgaaaaaaaggcagtcgccatttcattgaat
ggtgaattaaaagatttgaatgtgcctttaaccacgggtgggaaatttcgcattattaca
aaagatgatccggaagggttagaaatcttgcgtcatgatacggcacacgtattggcggag
acgattaaagagttgtatccggatgctcaaattacaattggtccagtgattgagaatggt
ttcttttatgatatctatcgagataagccatttacgacggatgattttgacggcattgag
cagcgtatgcgtgagatcgttgatcgcaatgaacctattcaacgtgaggaatgggatcgt
gatgaggcgattaaatactttgaatccattggcgaaacatttaaagctgaaatcattcgt
gatattccagcgggacaaatcatttcgttatatcgtcaagggaaattcttggatttatgt
cgagggcctcatttgccatcaactgggcgattaggtaaagcttttaaattaatgaaatta
gcgggtgcctattggcgtggtgattccaaaaacccaatgttacagcgtatatatggaaca
gcctgggcaagtgaagagcagctaaaacaacatttacatatgttggaagaagctgaaaag
cgtgatcatcgcaaactggggcgtgagatggatttgttccatatgcaagacgaagcaccc
ggtagcgtattctggcatccaaaagggtggacgatttaccgcgagttgcagaactatatt
cgcagacgcatttccaaagttgggtatgtcgaagtgaacacaccgattatggtggatcgt
attttgtgggaagcgtcgggtcactgggaaaaattccatgagaacatgtttatttctgaa
actgaagataagctgtttgcgttaaagcccatgaactgcccatgccatgtgcagattttc
cgtcaagggattaagagttatcgtgacttgccgttgcgtatggcggaatttgggtgttgt
catcggaatgaaccgtcgggcgcattgcatggattgatgcgcgttcgttcatttgttcag
gatgatgcgcatattttctgtcaggaagatgatattacgtctgaaacaaaagcgttttgt
gaactgttgatgagtgtctacaaagactttggatttaccgatgtgcggattaagttctcg
gatcgtcctgcaaagcgagctggaactgacgcaacgtgggataaagccgagggcgcgttg
atggacgccgtaaaagcatccgggcttgaatatacgctaaaccctggcgagggtgcattt
tacggtcctaaattagagttcgtactgcgagatgctattggtcgtgattggcagtgtgga
acgttacaggtagactttgtattacccgaacgattggatgcaaactatattggttcggat
ggtgaaaagcatcgccccgtgatgttacatagagctattctggggtcgattgagcgattc
tttggtatattaattgaaaactatgcaggcaaattgccgttatggttggcgccaactcaa
gttgtgattgcaacggttgttgatagtgctaacgagtatgcggaaaatatttgcaatcaa
ttaaaagaagcgggattgcgtgtcggtacagatttacggaatgaaaagattagttacaaa
gtacgtgatttaagcgtgcaaaagattcagtatattgctgttgttggtgccaaagaggct
gaagaacaaacaatttctttgcgtcaattggggtcacaagatcaaacagtaatgactttg
aaagaatttgttgctatgatgaaggaaaatgcagctccacctgcttaa
DBGET
integrated database retrieval system
