Candidatus Bodocaedibacter vickermanii: CPBP_00481
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Entry
CPBP_00481 CDS
T10196
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pbal Candidatus Bodocaedibacter vickermanii
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbal03400
]
CPBP_00481 (phrA)
Enzymes [BR:
pbal01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CPBP_00481 (phrA)
DNA repair and recombination proteins [BR:
pbal03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CPBP_00481 (phrA)
Prokaryotic type
CPBP_00481 (phrA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QOL19715
UniProt:
A0A7L9RTH4
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All DBs
Position
complement(520684..522123)
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AA seq
479 aa
AA seq
DB search
MSLKTIVWFRQDLRIHDNPALEYAAARGTIIPVYILDDDAPGQWKLGGASRWWLHHSLQS
LSNSLESKGHRLHIFAGDPQQILSDLQHQTQSDTIVWNRCYEPFSIARDKAIKESMTSAG
INVKSFNASLLFEPWTIKNLQGNFFKVFTPFWKHCLQQSVDPITLSGNSLDSAIPFLETL
ETSVQLDDFKLLPSNPNWATGFDWSPGEFTALHKLNEFFETAVMSYKEQRDYMDKSATSM
LSPHLHFGEISPRLIYHRCQELMALGQGDLSGVQHFLSELGWREFSYHLLYHFPVLPTEP
FRSEFNQFEWGNNPDDLRKWQQGKTGFPIIDAAMQELWQTGYMHNRARMIVASFLTKNLL
IHWRHGAEWFWDTLVDADLASNSASWQWVAGCGVDAAPYFRIFNPITQGEKFDPDGIYVK
RWIPELRDLDVKYIHQPWTAPLSVLKDAGVRLGHTYPEPMVDLKATRNRALQAYAGIRE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaaaaacaatcgtttggtttcggcaggatttacggattcatgataatcctgcg
ttagagtatgctgcggcaaggggcactatcattcccgtttatatcctggatgatgatgcg
cctgggcaatggaaactgggtggagcatcccgatggtggttgcatcacagtttgcaatca
ctgtcgaattccttagaatcgaaagggcatcgattgcatatttttgcaggggatcctcaa
cagatattaagtgatttgcaacatcagactcagtcagatacgattgtttggaatcgatgt
tatgagccgttttcaattgcacgtgacaaggcaattaaagaatccatgacgtctgcgggt
attaatgtgaaatcatttaatgccagtttgttgtttgagccgtggacaatcaaaaaccta
cagggaaatttctttaaggtgtttactccgttttggaaacactgtttgcagcaatcagtt
gatccaataacgctttcaggtaacagtttagattcagcgattcctttcttagaaacgtta
gaaacatctgtgcagttagatgattttaaactattgccgtctaatcccaattgggcaacg
ggatttgattggagtccaggagaatttaccgcgttacacaagctgaatgaattttttgaa
actgcggtcatgtcctataaagaacagcgcgactatatggataaaagcgcaacatcgatg
ttatccccacatttgcattttggtgaaattagccctaggcttatttaccatagatgtcaa
gaattaatggcgttagggcagggagatctttcgggcgtgcagcatttcttgtcggagtta
gggtggagagagttttcgtaccatttactgtatcattttccggtgttgcccacagaacca
tttcgatcggaattcaatcaatttgaatggggtaataacccagacgatttaagaaaatgg
cagcaaggaaaaacaggctttcccattattgatgccgcaatgcaagagctttggcaaacg
gggtacatgcataaccgtgcacgcatgattgttgcgtcgtttctaacaaagaacctgttg
attcattggcgtcatggggcggaatggttttgggatacattggtggatgcggatctggcc
agtaacagtgcaagctggcaatgggtcgctggatgtggtgttgatgccgcaccgtatttt
agaatctttaatccaattactcagggtgaaaagtttgatccggatggaatctatgttaaa
cggtggattccagagttgcgagatctggatgtaaaatatatccatcagccatggacagcc
ccgttatccgtgttaaaggatgcaggtgttcgactgggacatacgtatccagaaccaatg
gttgacctgaaagcaacacgaaacagagcattacaagcgtatgcggggattagagaatga
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