Candidatus Bodocaedibacter vickermanii: CPBP_00504
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Entry
CPBP_00504 CDS
T10196
Symbol
rnc
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pbal Candidatus Bodocaedibacter vickermanii
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CPBP_00504 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbal03019
]
CPBP_00504 (rnc)
03009 Ribosome biogenesis [BR:
pbal03009
]
CPBP_00504 (rnc)
03036 Chromosome and associated proteins [BR:
pbal03036
]
CPBP_00504 (rnc)
Enzymes [BR:
pbal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
CPBP_00504 (rnc)
Messenger RNA biogenesis [BR:
pbal03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CPBP_00504 (rnc)
Ribosome biogenesis [BR:
pbal03009
]
Eukaryotic type
90S particles
RNase
CPBP_00504 (rnc)
Prokaryotic type
rRNA processing factors
CPBP_00504 (rnc)
Chromosome and associated proteins [BR:
pbal03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
CPBP_00504 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
YetF_N
Motif
Other DBs
NCBI-ProteinID:
QOL19737
UniProt:
A0A7L9RSZ8
LinkDB
All DBs
Position
complement(538806..539477)
Genome browser
AA seq
223 aa
AA seq
DB search
MIDLQVALGYQFNKPYLLEFALTHPSFYSNQKDKMPINHFERLEFVGDRVLGLIVGDMLY
QEFKTAKEGELARRLAWLVCRETVAKVARLMTIPTVFKYSRASEENNTQWMTFLSDACEA
LIGAIYYDGGLSAANKVIRKFWEPMLHQQGAVKDNKTQLQEYAQAQFKILPKYKLITQSG
PSHNPEITVECSVNDYQMTAKGSNKKMAENECAHKLLAMLKTL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatttgcaagttgctttagggtatcaatttaataagccatacttattagagttt
gctctaacacatcctagcttttattctaaccaaaaagacaaaatgccgatcaatcatttt
gaacggttggagtttgtgggagatagagtgttaggtttgattgttggtgatatgttatac
caagaattcaaaacggctaaggaaggcgaacttgcgagacgattagcgtggttagtctgt
cgggaaactgtggctaaagttgcaaggttaatgacgatcccaacagtctttaaatattcc
agagcatcagaagaaaacaacacccagtggatgacgttcttgtcagatgcttgcgaagcg
ttgattggagccatttattatgatggggggctgtctgctgcaaataaagtcattcgcaag
ttttgggaacccatgctgcatcagcaaggtgccgttaaagataataaaactcaattgcaa
gaatatgctcaagctcaattcaaaattttaccaaaatacaaactaattactcaaagtggt
ccatcacataatccggaaattacagtggaatgtagtgttaatgattatcagatgaccgca
aaaggtagcaataagaaaatggctgaaaacgagtgtgcacacaagttattagctatgtta
aaaacattatag
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