Candidatus Bodocaedibacter vickermanii: CPBP_00552
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Entry
CPBP_00552 CDS
T10196
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pbal Candidatus Bodocaedibacter vickermanii
Pathway
pbal00300
Lysine biosynthesis
pbal00470
D-Amino acid metabolism
pbal01100
Metabolic pathways
pbal01110
Biosynthesis of secondary metabolites
pbal01120
Microbial metabolism in diverse environments
pbal01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CPBP_00552 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CPBP_00552 (dapF)
Enzymes [BR:
pbal01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CPBP_00552 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
QOL19784
UniProt:
A0A7L9RT72
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All DBs
Position
588218..589006
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AA seq
262 aa
AA seq
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MLFHKMHGLGNDFIILKHTKILAPVDVISLCDRHTGIGADQLITYTDDEESVVRFYNQDG
TAAEQCGNGIRCLAWLLMTQRKQASIKVQSPTGHHEAWLLDDGQVRITMGQPEFTWDDQP
ISQQLDLLDLFTDLAHKPDMVAVSMGNPHAVIFTQHPTIEMAETYGPHVEHHRLFPNRTN
VHFVHVESQDHITMIPWERGTGITLACGSGACAVHAAALKKGLIDPICDITMPGGTVTLE
TRDDGVIVLTGPATYVFEGKIA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgttattccataaaatgcatgggttgggtaatgattttattatattgaaacataccaaa
atacttgcgcctgtggacgttataagtttatgtgatcgacatactggaattggtgcagat
caattgattacttatacggatgacgaggaatcagtcgttcggttttataatcaagacgga
actgcggcagaacaatgcggtaatggcattcgatgtttggcatggttattgatgacacaa
cgcaaacaggcgtctattaaggtgcaatctccaacagggcatcatgaagcgtggctattg
gatgatgggcaagtacgcattacaatggggcaaccagagttcacatgggacgaccaaccg
atatctcaacagcttgatttgttggatttatttacggacctggcacacaaaccagatatg
gtggcggtatccatggggaatccccatgcggtgatttttacgcagcatccaaccattgaa
atggctgaaacttatggaccgcatgttgaacaccatcgattgtttcctaatcgtacgaac
gtacatttcgttcatgtggaatcacaggatcacattacaatgattccttgggagcgtgga
actgggattactttggcatgtggcagcggagcgtgtgcagtgcatgcggcggccttgaaa
aaaggattaattgaccctatatgtgatattacgatgccaggcggtacagtcacattagaa
actcgtgatgatggcgttattgtgctaacagggcctgcaacctatgtctttgaaggaaag
attgcgtaa
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