Candidatus Bodocaedibacter vickermanii: CPBP_00683
Help
Entry
CPBP_00683 CDS
T10196
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pbal Candidatus Bodocaedibacter vickermanii
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbal03016
]
CPBP_00683 (truB)
Enzymes [BR:
pbal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CPBP_00683 (truB)
Transfer RNA biogenesis [BR:
pbal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CPBP_00683 (truB)
Prokaryotic type
CPBP_00683 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QOL19912
UniProt:
A0A7L9RTM5
LinkDB
All DBs
Position
complement(744621..745505)
Genome browser
AA seq
294 aa
AA seq
DB search
MINGWLNINKPEGVTSAHVLNRLKRAFPRKTKIGHAGTLDKFACGVLPVAIGYATKTIPM
IMDAHKTYTFTVLWGVQTDTDDRDGEVIATSDVIPAIESILSALQKFVGVIQQMPPIFSA
LKIDGKRASDRARKGEDVELESRQIEIFELKVVEHHQHETTFQVMCSKGTYVRALARDLA
VTLGTVGHVTYLRRDQVGTFLVGEAILLEKDFKMDHNLATKIVSAIIPIRTVLDDIPAVS
CTESAITHISRGQSIPTSLQDQDMVFAVDKTDIIATGFVKDLVFYPKNVFINGV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacggatggttgaatattaataagccggaaggtgtgacatcggcgcatgttctg
aatcgtttgaaacgggcatttccgcggaaaacaaaaattgggcatgcggggacgttggac
aagtttgcgtgtggggtgctgcccgtggcgattgggtatgcaacaaagacaatccccatg
atcatggatgcgcacaagacgtataccttcacagttttgtggggtgttcagacggatact
gatgatcgcgatggtgaagttattgcgaccagtgatgtgattcctgccattgaatctatc
ttaagtgctctgcaaaaattcgtaggtgtaattcaacaaatgcctcctattttttcggcg
ttgaaaattgatgggaaacgagcatctgatcgagcgcgaaaaggtgaggatgtcgaactg
gaatccaggcagattgaaatctttgaattgaaggttgtagaacatcatcaacatgagaca
acatttcaagtgatgtgcagtaagggaacgtatgtaagggcattggctagagatttggct
gtcacgttggggacagtgggacatgttacatatttaaggcgagatcaagttggaacgttt
ttagtaggtgaggcgattttgcttgaaaaagattttaaaatggaccataatctggcaacg
aaaatagtgtctgctattatccccattaggaccgttctggacgacatcccggcggtttcc
tgtacggaatcagcaattacacatatatccagaggtcaaagcatccctacgagtttgcag
gatcaggacatggtgtttgctgttgataaaactgacattattgcgactgggtttgttaaa
gacctggtattttatccgaaaaatgtatttataaatggagtttga
DBGET
integrated database retrieval system
