Candidatus Bodocaedibacter vickermanii: CPBP_00920
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Entry
CPBP_00920 CDS
T10196
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pbal Candidatus Bodocaedibacter vickermanii
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbal03400
]
CPBP_00920 (radA)
DNA repair and recombination proteins [BR:
pbal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CPBP_00920 (radA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Zn_ribbon_LapB
DnaB_C
Lon_C
AAA_16
DUF7125
AAA_22
NTPase_1
AAA
nSTAND_NTPase5
nSTAND3
AAA_5
RecA_N
GvpD_P-loop
ABC_tran
SLFN-g3_helicase
AAA_24
AAA_14
TIP49
MCM
NACHT
ATPase_2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QOL20139
UniProt:
A0A7L9RUE3
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Position
996116..997492
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AA seq
458 aa
AA seq
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MAKTHKTFACQACGSVYPRWVGKCEACGEWNTIVEEVESAPIPKGMKPGKSSGLDLVALN
GPMKSFPRYVSSIEEFDRVCGGGLVPGSIVLIGGDPGIGKSTLLLQVSAALSSDLSVAYV
SGEEAVDQIRMRAKRLGLSESQVMLAASSNVRDILSTLDVVNGPKVAVVDSIQTMYIDNV
ESAPGTVTQVRGCTAELVRVAKSRDLVIILVGHVTKEGMIAGPRVLEHMVDAVFYFEGDR
GHQFRILRSVKNRFGAADEIGVFEMREEGLQEVTNPSSLFLENRSSELSGVSVFAGLEGS
RPLLCEIQGLVAPSPLASPRRTVVGWDAGRLSMILAVLETRCSIQMSNRDVYLNIAGGLK
ITEPAADLAVAACLLSSFTNTPLPEDTVIIGEIGLGGEIRPVKQIEVRLKEAAKLGFKQA
IIPATSKLSENKHNISIIAVKHLSDMMRFFNVRQKRDS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggctaagacacataaaacatttgcatgtcaagcgtgcggcagtgtgtatccccgctgg
gttggaaagtgtgaagcctgtggtgagtggaacacgattgttgaagaggttgagtctgcg
ccaattcctaaggggatgaaacctggaaaaagcagcggattggatttggttgctttaaat
ggtcccatgaaatcatttccgcgatacgtatcatcgattgaagaattcgatcgcgtatgt
gggggtggtttggttccggggtcgattgtattgatcgggggagatcccggcattggaaaa
tcgacattgttattgcaagtcagtgcggcgctgtcatcagatttatcggttgcgtatgta
tcgggtgaagaagcggtggatcagattcgcatgcgggcaaaacgattggggttatctgaa
agccaagtcatgttggcggcatcatcaaacgttcgggatattttatcaaccttagacgtt
gtaaatggcccaaaggtggctgttgtggactcgatacagacgatgtacatcgataatgtt
gaatcggcgccgggtacggtgacgcaggtgcgtgggtgtacggcggaacttgttcgggtt
gcaaaatcacgtgatttggtcatcatcttggtggggcatgtcacaaaagaaggcatgatc
gcaggtcccagagtcttagagcacatggtggatgctgtgttttactttgaaggtgatcgt
ggacatcagtttcgaattttacggtcggtgaaaaaccgatttggtgcagctgacgaaatt
ggtgtatttgaaatgcgggaagaaggattacaagaggtaacaaatccctcatctttattt
ctagaaaatcgatcttcagaactcagtggtgtttcagtttttgcagggttagaaggatcc
agacccttattgtgtgaaattcaggggttggtggcgccatctccacttgcaagtccacgg
cgtaccgttgtaggatgggacgcaggaagattgtccatgatattagcggttctggaaacg
cggtgttctattcaaatgagcaatcgggatgtatatttaaacattgccgggggtttgaaa
atcacagaacctgcggcagatctagcggtcgctgcgtgtttgttgtcatcgtttacgaat
acacccttacccgaagacacagttatcattggtgaaattgggctgggcggcgaaattcga
cccgttaagcaaatcgaggttcgattgaaagaggcggctaagctagggtttaaacaagca
attattccagccacatcaaagctatctgaaaacaaacacaatattagtattattgctgtt
aagcacctttcagatatgatgcgattttttaatgttcgacagaaaagagactcatga
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