Candidatus Bodocaedibacter vickermanii: CPBP_01147
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Entry
CPBP_01147 CDS
T10196
Symbol
rsmB
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pbal Candidatus Bodocaedibacter vickermanii
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pbal03009
]
CPBP_01147 (rsmB)
Enzymes [BR:
pbal01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
CPBP_01147 (rsmB)
Ribosome biogenesis [BR:
pbal03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CPBP_01147 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltransf_31
Ubie_methyltran
Methyltr_RsmF_N
MTS
Methyltransf_15
Methyltransf_3
Methyltransf_25
PCMT
Motif
Other DBs
NCBI-ProteinID:
QOL20355
UniProt:
A0A7L9RV94
LinkDB
All DBs
Position
1275463..1276791
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AA seq
442 aa
AA seq
DB search
MQQSAHLQSVVDVINEWKITRHKPFDHILNQYFRDRRFIGSKDRQQISWLCYEVFRHKLI
LEWWAEWGMKKPCIEAEEPYAIKVLAIYLSLVRKKSPGEIHELFTGEKYGVRQLERIERQ
MIETIWKQPTYGKDPLHHDLMPEHIRLNTPKWIYDIILEGDAEGKAMLSSLNYPATVDLR
VNTLKADRDSILMTFNSIGVDALPTPHSSWGIRIQKRFNLNTLDAYKTGLVEIQDEGSQI
LCQVTNAKPNTTVVDYCAGAGGKSLAMAMMMNNKGKLILCDTASWRLEKSNERLRKAGVF
NVQQKIVLETPEGDEAVLALTEKADTVLIDAPCSGTGTWRRNPDARFRLSQKELDELIEI
QAKILNEASFLVKQGGCLVYATCSIVSSENQHQVNRFLESHPDFKLETIEFNGVIHEMLN
IRPHTYRTDGFFVARLRRISAV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaatcagcacatctacaatccgtcgtggacgttattaacgagtggaaaataacg
cgtcacaagccatttgatcatattctgaaccagtatttcagggatcgtcgatttattgga
tcaaaagatcgccaacaaatatcatggctatgttatgaagtgtttcgccataagttaatt
ttagaatggtgggctgaatggggaatgaaaaaaccctgtatcgaagcagaagagccctat
gcgattaaagtattggccatttatttaagtttggtgcgcaagaaatctcccggtgaaatt
catgaattgttcacaggtgaaaaatatggcgttcgccagttagagcgcattgaacgccaa
atgattgaaaccatttggaaacagccaacctatggtaaagatcccttgcatcatgacttg
atgcctgaacatattcgattgaatactccaaaatggatctatgacattattttggaaggc
gatgccgaaggcaaagcgatgttgtcgtcactgaattatccagcgacggttgacttgcga
gtcaatacgcttaaagctgatagagacagcatcttgatgacctttaattctatcggtgtg
gatgcccttccaacgccacattcttcgtggggaattcgcattcaaaaacgctttaaccta
aataccttagacgcatacaagacaggtttagttgaaattcaggatgaggggtcccagatc
ctatgtcaggtgaccaatgccaagccaaacacaacggtggttgattattgtgcaggtgct
ggcggtaaaagccttgcgatggccatgatgatgaataacaaaggtaagctgattctgtgc
gatacagccagctggcgtcttgaaaaatccaatgaacgcctgcgtaaagcaggtgtattt
aacgttcagcaaaagatcgttttagaaacacctgagggcgatgaagctgtgcttgcactg
actgaaaaagccgatacggtattaatcgatgcgccctgttctggaactgggacgtggcgt
cgtaatccagatgctagattcagactgtcacagaaagaactggatgagctaatcgaaatt
caagcaaagatattgaatgaagccagtttcctagtgaaacaaggtggctgtttagtgtat
gcgacctgttcgattgtatccagcgaaaaccaacatcaagtgaatcgctttctggaaagc
catccagactttaagttggaaaccattgaatttaatggtgtaatccacgagatgttaaac
atacgaccgcacacatatcggacggatggattctttgttgcacgactgcgtcgaatatcg
gctgtataa
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