Candidatus Bodocaedibacter vickermanii: CPBP_01165
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Entry
CPBP_01165 CDS
T10196
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pbal Candidatus Bodocaedibacter vickermanii
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbal03032
]
CPBP_01165 (gyrB)
03400 DNA repair and recombination proteins [BR:
pbal03400
]
CPBP_01165 (gyrB)
Enzymes [BR:
pbal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CPBP_01165 (gyrB)
DNA replication proteins [BR:
pbal03032
]
Prokaryotic type
DNA Topoisomerases
CPBP_01165 (gyrB)
DNA repair and recombination proteins [BR:
pbal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPBP_01165 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QOL20373
UniProt:
A0A7L9RUS9
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All DBs
Position
complement(1293454..1295856)
Genome browser
AA seq
800 aa
AA seq
DB search
MTTKTTEDTAYGAHSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMIYEVVDNAIDESLAG
HCDAVYISLNKDGSVTVRDNGRGIPVDIHPEEGISAAEVIMTQLHAGGKFDQNSYKVSGG
LHGVGVSVVNALSEYLDLRIWRNGTEHYMRFTMGDSVAPLAKVGPSDKRGTEVTFKPSPD
IFAIVEFDFDTVEHRLRELAFLNSGVRLILQDLRGDEPREVVFFFEGGIKSFVEYLDRGK
VSLLGNVINVKGERDGMTVEAALEWTTAYHETMLCFTNNIPQKDGGTHLAGFRGALTRTV
NQYVTESAAFKKSKINLMGDDPREGLTCVLSVKVPDPKFSSQTKDKLVSSEVRPVVESII
NDRLQQWLEENPQEAKKVVEKVIEAASAREAARKARELTRRKDVLDMASLPGKLADCQEK
DPALCELFLVEGDSAGGSAKGGRERRFQAILPLRGKILNVERARFDKMLASAEVGTIITA
LGTGIGKDDFNLDKLRYHKIVIMTDADVDGSHIRTLLLTFFFRHMPSLIERGYLYIAQPP
LYKVKRGQSELYLKNDADMNAYLIQTTTEHGVIETATGTRLFGQDLQAILNMAYTVGEKI
LKLSEKIGSLHLAEAIALEGGFHVDHLGSKIDAIIGRLKQLDPSSKWTATVLNTDAVTFT
RHDQRLKEVYDIDGYHLNMNDAQYLNSKADWLKEFFAAPATLVIKDSDRHPVIGPVSLMQ
KSQELAKKGIYVQRYKGLGEMNEDQLWETTMDPNARTLLQVNIAHMADADDIFSTLMGDV
VEPRRNFIQDNALKVVNLDA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgaaaactactgaagatactgcttatggcgctcattcgattaaggtactaaaa
ggtctggatgcggttcgcaaacgacccggtatgtacattggcgatacggacgatggttcc
ggtcttcaccatatgatttatgaagtcgttgacaacgcaatcgatgaatcgttggcgggt
cattgtgatgccgtctatatctcactcaataaagatggttcggtcaccgttcgcgataac
ggtcgcggtatccctgttgatattcaccccgaagaaggcatttctgcagctgaagtcatc
atgacccaactgcatgccggtggtaaattcgatcagaactcgtacaaagtatccggtgga
ttacacggtgtgggtgtgtctgtagttaacgcgttgtctgaatatttagaccttcgcatt
tggcgaaacggcacggaacattacatgcgctttacaatgggagactctgttgccccttta
gcaaaagtaggtccctctgacaaacgcggaacagaggttacctttaaaccctcacccgat
atctttgcgattgttgaatttgattttgataccgttgaacatcgcttacgcgaattagcc
tttttaaactctggcgttcgattaatcttacaagatttgcgtggcgatgaacctcgcgaa
gttgtattcttttttgaaggaggcatcaaatccttcgttgaatacttagatcgcggcaaa
gtctcattattaggcaacgtcattaatgttaaaggcgaacgcgatggcatgacggtagaa
gccgccctagaatggacgactgcgtaccatgaaaccatgttatgttttaccaacaacatc
ccgcaaaaagacggtggaacgcaccttgctggtttccgcggagcactcacacgcacagtt
aaccaatatgttacagaatctgcagcatttaaaaaatctaaaatcaacttaatgggcgat
gacccccgtgaaggcttaacctgtgtattatcggttaaagttcctgatccaaaattttca
tcacaaaccaaagacaaattggtttcatccgaagtccgccccgttgtagaaagcatcatc
aacgatcgcttacaacagtggttagaagaaaacccacaagaagcaaaaaaggttgttgag
aaagttatcgaggctgcctctgctcgtgaagctgctcgaaaagcccgcgaattaacccgt
cgtaaagacgtattggacatggcatccttgcctggaaaattagccgactgccaagaaaaa
gatccagccctgtgtgaattattcctggtcgagggagactccgcaggtggttctgccaaa
ggcggtcgcgaacgtcgctttcaagcgattcttcctctacgaggtaagatcttgaacgtt
gaacgtgctcgttttgacaagatgttagcttctgccgaagtgggtaccatcatcaccgca
ttgggcacgggtatcggcaaagacgactttaatcttgataaactacgctatcacaaaatt
gttatcatgacagacgccgatgtggatggaagccatatccgaacactattgctaaccttc
tttttccgtcacatgccctcattgattgaacggggttatttgtacattgctcaacctcct
ttatataaagtaaagcgcggacaatcggaactgtatttgaaaaacgacgcggatatgaat
gcctatttgattcaaaccacaaccgaacacggggtcattgaaacagccactggcacacgc
ttgtttggtcaggatttacaagccattttaaatatggcgtataccgtgggtgaaaagatt
ttaaaactatccgaaaaaattggatccttgcatttagctgaagccattgccttagaaggt
ggattccacgtggatcacttgggttcaaaaatagatgccattatcggacgtttaaaacaa
ttggatccaagcagcaaatggacggcaactgtcttaaacaccgacgctgtaacattcacc
cgtcatgaccaacgtctgaaagaagtctatgacattgatggctatcatttaaatatgaat
gacgctcaatacttgaactctaaagccgattggttaaaggaattcttcgctgcacctgca
acgttagtcataaaagattcggatcgtcaccccgtgattggtcctgtgtcgttgatgcaa
aaatctcaagagcttgcgaaaaaaggtatttatgttcaacgctataaaggtcttggagaa
atgaacgaagaccaactgtgggaaacaacaatggatcctaatgccagaacgttattgcaa
gtgaacatcgcgcacatggctgatgcagatgatattttctccactctcatgggcgatgtc
gtggaaccccgtcgtaactttatccaagacaacgccctaaaggttgtgaacttggatgct
taa
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