Candidatus Bodocaedibacter vickermanii: CPBP_01238
Help
Entry
CPBP_01238 CDS
T10196
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pbal Candidatus Bodocaedibacter vickermanii
Pathway
pbal00470
D-Amino acid metabolism
pbal00550
Peptidoglycan biosynthesis
pbal01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbal00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CPBP_01238 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CPBP_01238 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbal01011
]
CPBP_01238 (murD)
Enzymes [BR:
pbal01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CPBP_01238 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbal01011
]
Precursor biosynthesis
Amino acid ligase
CPBP_01238 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Bac_rhamnosid
Motif
Other DBs
NCBI-ProteinID:
QOL20444
UniProt:
A0A7L9RV52
LinkDB
All DBs
Position
1367516..1368868
Genome browser
AA seq
450 aa
AA seq
DB search
MKYIIGLGKTGVSVVRYFLEHQIPFIAWDDTPVLQEKVQLMGGAIVAPSQAPWHAVEELI
LSPGIPTTFPTPHVAVQLAKKYHIPYVGDVEYWYKRTQYSGYRYVGVTGTNGKSTTHAII
DYVLNALNLPHFSGGNSGVPVLDAPKLASGAVINLEMSSYQLDILDQMTFDAGVILNITP
DHLDRHGNMENYILSKITQITRVKPGGLKVVGVDCPGGKEAYDSLTASGQTDIIPISATQ
VVEKGIYTVGNQVISTENDGNTVLGLIPDSLPGAHNAQNVMAAMLVCRHLEIDVSEFFRV
LPSYPGLAHRQERVLDTPKALFINDSKATNADATLPALKTYLNVYWIVGGIAKDEGVVPL
LPYLEYVEKIFLIGESAERFQAELKSVSPLVLKMDTLDNAMNFIAKELDQADHKVTVLLS
PACASQDQFQNFEHRGRVFTEIVQQQFGSK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacatcattggtcttggtaaaacgggggtatcggttgttcgatattttttagag
caccaaattccatttattgcctgggatgatacacccgtactgcaagaaaaagttcaatta
atggggggggcaattgttgcgcccagccaagctccttggcatgcagttgaagaacttatt
ttaagtccggggattccaaccacatttccaaccccccacgtggctgtgcaacttgcgaaa
aaatatcacattccctatgttggtgatgttgagtattggtataagcgtactcaatattcc
gggtatcgatatgtgggggtgacgggaactaacggaaagtctactacccatgcaattatc
gactatgttttaaatgcgttgaatcttccccatttttcaggtggaaatagcggtgtgcct
gtgttggatgcgccaaagcttgcatctggcgccgttatcaatctggaaatgtcgtcgtat
caattagatattctggatcaaatgacctttgatgcgggggtaatcttgaacattacgcca
gatcatttggatcgtcatggaaacatggaaaactatattttatccaagataactcaaatt
acccgtgttaagcccggagggttaaaggttgttggtgttgattgtccagggggtaaagaa
gcttacgatagtcttactgcatctgggcagacagacattattcccattagtgcaacccaa
gttgtcgaaaaaggcatatatactgtgggtaatcaagtcatttcaacggaaaatgatggc
aataccgttttggggttaataccagatagtttacctggggcgcataatgcgcaaaatgtt
atggctgctatgttagtatgcaggcatttggaaattgatgtttcagagtttttcagggtt
ttgccatcgtatccagggctagcgcatcgacaagagcgggtattagatacaccaaaggca
ttgtttattaacgacagcaaagccactaacgcagatgcaacgttgccggcgcttaaaaca
tatctcaatgtttattggattgtgggtggcattgcgaaagatgagggcgttgttccgttg
ttgccctatttagagtatgttgaaaagatttttttaatcggtgaatctgcggagcgtttt
caagcagagctaaagagtgtatctcctttagtgttaaaaatggatacgttagataatgcg
atgaattttattgcaaaagaattagatcaggcggatcataaggtgaccgtgttattatcg
ccagcatgtgcaagtcaggatcaattccagaattttgaacatcgtggacgggtctttaca
gaaatagttcagcaacagtttggatcaaaataa
DBGET
integrated database retrieval system
