Pseudomonas batumici: NUH87_00100
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Entry
NUH87_00100 CDS
T10437
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
pbam Pseudomonas batumici
Module
pbam_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pbam02000
]
NUH87_00100
01504 Antimicrobial resistance genes [BR:
pbam01504
]
NUH87_00100
Transporters [BR:
pbam02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NUH87_00100
Antimicrobial resistance genes [BR:
pbam01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NUH87_00100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
WVV62576
LinkDB
All DBs
Position
23064..26198
Genome browser
AA seq
1044 aa
AA seq
DB search
MNNFNLTDWALRHRAIVLFLLLIVAVAGLFSFTKLGQLEDPNFSVPSMTAGVVWPGATAQ
QIQDEVLNRMEKKFEQIDHFEKVVTFARQGYGGMTLTVRGGTSKADQREAWYQARKKLND
LRLELPDGVTGPVVNDEYGDVYGLMYAVKGDGIDHADLSNATEDIKRRLLKVPMVKKVDL
IGEQAKRVYVEFSHERLAALGITPLAIAESLRAQNALQAAGQIDTQGDRVVVRVSGQFAS
DDDIRNVPVAAGGRMLKLGDFATIKRGYEDPPTYTVRHNGQPVLMLGISMTDDGNVVELG
KAMDVEVAKIQSELPHGVELERVADQPTTVKDAVWDFGRSLIEALVIVIAVSLASLGWRT
GLVVATSVPLVLGGVAILMLAMGWNLERISLGSLIIALGLLVDDAIIAIEMMLVKMEAGW
DRVKAASFSYQSTAMPRLTGALITVAGFMPIGLSKSTTGEYAGGIFWIVGAAVVFSWICS
GIFTPYLAVKMLPKDFGKHQHAGDPYDTRMFRKLRVMIDRAIQRRWTVIGVTLGALALAL
MGLKFVPQQFFPSSSRPELVIDLRMKEGSSFAATAEQVKRMEMVLAKDEDVKFYTAYTGA
GAPRFYLALNPELPNPGFAQFVVMTKDLEARERVRSRLMASVDQQFPQVWVRVTRLELGP
PVGFPVQFRVVGPDTQVVRKIAREVEHVVNSNAKVRDVQLDWNDPVRALKVELDQDKARA
LGLTPADVSLITQTVMNGATLSQLREHEDLIDIVARAVPEERLNLDTLKDINLYTRNGTV
VPLSEVAQVRYELEEPVLWRRNRDMAITVRADVKDGEQGVSVTQEIQPMLKDIEATLPSG
YRIDVGGALEESDKANHALLAVAPLMLLTILLLLMLQLQDFSRMLMVVLTAPLGLIGVVP
ALLVFHAPLGFVAILGIIALGGMIMRNSVILIDQVRIEIEEGRDPWNAVLDAAIHRTRPV
ILTALATVLAMIPLTRSVFWGPMAIAIMGGLTVATLLTIFFVPALYAAWFRVRRPSAGSA
VVSQGEPFAAALPADDAVAGQPDA
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacttcaacctcaccgattgggcgctgcgtcaccgcgccatcgtcctgttcctg
cttctcattgttgcagtggccggtctgttcagcttcaccaagcttggccagctcgaagac
ccgaacttttcggtgccgtcgatgaccgccggagtcgtctggccgggcgcgaccgcccag
cagatacaggacgaagtcctgaaccgcatggagaagaagttcgagcagatcgaccacttc
gaaaaggtcgtcaccttcgctcggcagggctacggcgggatgacgctgaccgtgcgcggc
ggcacctcgaaggccgaccagcgtgaggcctggtatcaggcacgcaagaaactcaacgac
ttgcgcctggaactgcctgacggtgtgaccggtccggtggtcaacgacgaatatggtgac
gtgtacggcctgatgtatgcggtcaagggcgacggcatcgatcacgccgacctgtcgaat
gcgaccgaggacatcaagcgccgtctgttgaaggtgccgatggtcaagaaggtggacctg
atcggcgagcaggccaagcgcgtctacgtcgagttctcccacgagcgcttggccgcgctg
ggcatcacgccgctggcgatcgccgaaagcttgcgggcacagaacgccctgcaggcggcg
ggacagatcgacacgcaaggggatcgcgttgtcgtgcgagtgagtggccagtttgccagc
gacgacgatattcgcaatgtgcctgttgcggcgggcggccggatgctcaagctgggcgac
tttgccaccatcaagcgcggttatgaggatccgccgacctacaccgtacgccacaatggc
cagccggtgctgatgctcggtatctcgatgaccgacgatggcaacgtcgtcgagctgggt
aaggcgatggacgtggaggttgcgaagatccagtccgagttgccccatggtgtcgagctg
gagcgggttgccgaccagcccaccacggtgaaggacgcggtctgggacttcgggcgttcg
cttatcgaagcgctggtcatcgtgattgccgtcagcctggcaagcctgggctggcgtacc
ggtcttgtggtcgcgacctcggtgccgctggtgctgggtggcgtcgcgatattgatgctg
gcgatgggctggaacctggagcgtatttccctcggctcgctgattatcgcgctgggcctg
ctggtcgatgatgcgatcattgcgatcgagatgatgctggtgaagatggaggcgggctgg
gaccgtgtcaaggccgcctccttttcctaccagtccaccgccatgccacgcctgaccggt
gcgctgatcaccgtcgccgggttcatgccgatcggcctgtcgaaatcgaccacgggcgag
tatgccggcggcatcttctggattgtcggcgcagcggtggtgttctcctggatctgctcg
ggcatcttcacgccctaccttgcggtcaagatgctgcccaaggacttcggcaagcaccaa
catgctggcgacccgtatgacacccgaatgttccgcaagctgcgggtgatgatcgaccgg
gccatccagcgtcgctggacggtcatcggcgtgacgcttggcgctctggccctggcgctg
atgggcttgaagtttgtgccacaacagttctttcccagcagttcacgtcccgaactggtc
atcgacctgcgtatgaaggaaggctcctctttcgcggcgacggccgagcaggtcaagcgt
atggaaatggtgttggccaaggacgaggacgtcaagttctataccgcctacaccggggcc
ggcgcgccgcgcttctatctggcgctcaatcccgaactgcccaatcccggctttgcccag
ttcgtcgtcatgacgaaggaccttgaggcccgcgaacgggtccgctcgcgattgatggcc
tcggtcgatcagcagtttccacaggtctgggtgcgtgttacccggctggaactggggccg
ccggtcggtttcccagtacagtttcgcgttgttggccccgacacgcaggtggtgcgcaag
atcgctcgtgaagtggagcacgtagtgaactcgaatgcgaaggtacgtgacgttcagctc
gactggaacgacccggtgcgcgcgctgaaggttgagttggatcaggacaaggcccgggcg
ttgggtctcacgccggccgacgtgtcgctgatcacccagacggtgatgaacggcgcgacc
ctgtcgcaactgcgcgagcatgaagacctgatcgatattgtcgcccgtgccgtccccgag
gagcgcctgaacctcgacacgcttaaggacatcaacctgtacacccgcaatggaacggtg
gtgccactgtcggaggtcgcgcaggtacgctacgagcttgaagagccggtgctgtggcgt
cgtaaccgcgacatggcgatcaccgttcgggccgatgtcaaggacggtgagcagggcgtg
tcggtgacgcaggaaatccagccgatgctcaaggacatcgaggcgacgttaccttcgggc
tatcgcattgacgtgggtggcgcgctggaggagagcgacaaggccaaccacgcgctgttg
gcggtggccccgctgatgctgctcaccatcttgctgctgctgatgcttcaattgcaggac
ttctcacggatgttgatggtggtgctgaccgcgccgctgggcctgatcggcgtggtgccg
gcactattggtgttccacgcgccactggggttcgtcgcgatcctgggcatcatcgccctc
ggcggcatgatcatgcgcaactcggtgatcctgattgaccaggtgcggatcgagatcgaa
gaagggcgcgacccgtggaatgcggtgttggacgccgcaatccatcgaacccgtccggtg
atcctgacggcgctggccacggtgctggcgatgatcccgttgacccgcagcgtgttctgg
gggccgatggcgatcgcgatcatgggcggtctcaccgtggccacgctattgaccatcttc
ttcgttccggcactgtacgcggcctggttcagggtgcgtcggccttcggcgggctctgcc
gtggtttctcaaggagaaccttttgcagcagcacttccagcggatgacgcagttgccggt
cagccagacgcttga
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