Pseudomonas batumici: NUH87_05580
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Entry
NUH87_05580 CDS
T10437
Name
(GenBank) RNA-binding protein
KO
K11089
60 kDa SS-A/Ro ribonucleoprotein
Organism
pbam Pseudomonas batumici
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
vWA_Ro60
TROVE
VWA_CoxE
VWA_2
Motif
Other DBs
NCBI-ProteinID:
WVV63593
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Position
complement(1307340..1308887)
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AA seq
515 aa
AA seq
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MANTQLFQTRALPMACDTLNAAQAPAYAYTARHALAQLAVTGCLNQTFYASAESQLDEVL
KRVAELDSVFVAKAAIYARKKGHMKDMPALLLAALAAQHSTMLPVVFAQVVDNGKMLRNF
VQILRSGVTGRKSLGSQPKRLVQNWLNTASELQLLQASVGNQPSLADVLKMVHPKPSEAW
REAFFAWVIGKPVAIDALPPLTRSLLEFRVGATRQLPEVPFQLLGNETLDKHQWASLAMS
MGWQALRMNLNTLVRHGAFEVQGCAAAVAVRLADPEAVARARVYPYQLLAAYRMAGAEVP
QVIREALQDALELSLGNVPALRGSVVICPDVSGSMHSPVTGYRQGATTAVRCIDVAALVA
AAVLRKAPQARVMPFENKVVKVQLNPRDSVMSNAQKLAAIGGGGTRCSAPLAQLADERAW
VDTLILVSDNESWMDARRYGATETMQQWERIRQINPNARLICIDMQPGATTQAPDRPDIL
NVGGFSDAVFDVISQFTEGAYSAQHWMKTIDAMSI
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggccaatacccaactgttccagacccgtgccctgcctatggcgtgcgacacactgaat
gccgcccaggcaccggcgtatgcctatacggctcgccatgccctggcacagttggccgtc
accggttgcctgaaccagaccttctatgccagcgctgaaagccaactggacgaagtcctg
aagcgggtggccgaacttgacagcgtctttgtcgccaaggccgcgatttatgcccgcaag
aaggggcacatgaaagatatgccggcgctgctcttggcggccctggcggctcagcactcg
acaatgctgccggtggtgttcgcacaggtggtggataacggcaagatgttgcgcaatttc
gtacagatcctgcgcagcggtgttaccggacgcaagtccctggggtcgcagcccaagcgg
ttggtgcagaattggctgaacacagccagcgagctgcagttgctacaagcatcagtgggt
aatcagccttccctggcggatgtgctgaagatggttcaccccaagccgagtgaagcctgg
cgcgaggcattctttgcctgggtcatcggcaagccggtggcgatcgacgccctgccaccg
ctgactcgctcgctgctggagtttcgcgtcggtgcgacccggcaactgcctgaagtaccg
tttcagttgcttggcaacgagacgctggacaagcaccagtgggcttcgctggcaatgagc
atgggctggcaggccttgcggatgaacctgaacacgttggttcgccacggtgcctttgaa
gtccagggttgtgccgcggctgtggcggtgcggctggcagacccagaggcagtggccagg
gcgagggtttatccgtaccagttgctcgcggcctaccggatggcaggtgccgaagtgccg
caggtgatccgtgaagcattgcaggatgcgttggagctgtccctgggcaatgtcccggcg
ttgcggggctcggtggtgatctgcccggatgtctcgggttcgatgcacagtccggtcacc
ggctaccgccagggcgcgaccacggcagtgcgttgcatcgatgtggcggcactggttgcg
gcagccgtgttgcgcaaggcaccacaggcgagagtgatgccgttcgagaacaaagtagta
aaggtgcagctcaatccacgggacagtgtgatgagtaacgcccagaagctggccgccatt
ggtggtgggggcacccgttgttcggcaccgctggcgcagttggctgatgaaagggcctgg
gtagataccttgattctggtgtcggataacgagtcctggatggatgcccgtcgttacggc
gctacggaaaccatgcagcagtgggagcgtatccgccagataaacccgaatgcgcggttg
atctgcatcgacatgcaacccggtgcgaccacccaggcaccggaccggccggacatcttg
aatgtcggcggtttcagtgacgcggtgttcgatgtcatcagccagttcaccgagggtgcc
tatagcgcgcagcactggatgaagacgattgacgccatgtcgatatga
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