KEGG   Pseudomonas batumici: NUH87_05930
Entry
NUH87_05930       CDS       T10437                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
pbam  Pseudomonas batumici
Brite
KEGG Orthology (KO) [BR:pbam00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pbam02044]
    NUH87_05930 (tssF)
Secretion system [BR:pbam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   NUH87_05930 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WVV63658
LinkDB
Position
complement(1380432..1382219)
AA seq 595 aa
MSFNHYYQSELTALRQLGRRFAERSPALAPFLGQAGRDPDVERLLEGFAFLTGRLRQKLD
DELPELSHSLMQLLWPNYMRPLPAFSILQFDPLKRSGPALRVERDTPVESVPIDDVRCRF
RTCYPTEVLPLDLTALTYSVKGDGSLLSLRLEMSCDGHFGELDLSRLRLHLAGERYISQM
LYLSLLRNLEGIELIPLDVAGKPLNGVNGTPMAFKMPGDRVQPVGFAEEEALIPYPLNTF
RGYRYLQEYFAFQDKFLFVDLNGLDLLKALPEDTLKQMHGLELRFDIRKSGIQRLRPTLD
NVKLYCTPIVNLFKHDALPIRLDGKQDEYLLLPAEYDLENCGVFSIEGVTGWKPGGLGYQ
AYVPFESFEHDPSFDVPQSRPHYSIRQRTSLLHDGLDTYLSFGIRHTEAHETLSIELMCT
NQNLPRRLKLGDICMACEETPEFLSFRNITPATSSFAPPLSHDFLWKLISNMSLNYLSLA
NVDALKVILETYDLPRYYDQHAQKVSKRLLGGLKSIRHQHVDRLHRGLPLRGLRTELTID
PQGYIGEGDLFVFASVLNEFFALYASLNSYHELRVKSTQGEVYQWTPRMGLQPLL
NT seq 1788 nt   +upstreamnt  +downstreamnt
gtgtcctttaaccactactaccaaagcgaactcaccgcacttcgccagttgggtcgtcga
ttcgccgagcgtagcccggcgttggcgccgttcctggggcaggccgggcgggatccggac
gtggagcggttgctggaaggctttgcgttcctgaccgggcgtttgcggcagaagctcgat
gacgagttgccggagctcagccattcattgatgcagttgctgtggccgaactacatgcgg
ccgctgccggcgttcagcatcttgcagttcgacccgttgaaacgttccggaccggcgctg
cgggtcgagcgcgatacgccggtggaaagtgtgccgatcgatgacgtgcgttgccggttt
cgcacctgctacccgacggaagtcctgccgctggacctgaccgcgttgacgtactcggtg
aagggcgacggttcgctgttgagcctgcgcctggagatgagctgcgacgggcatttcggt
gagctggacctgagtcgtctgcgcctgcacctggccggtgagcgttatatcagccagatg
ctttacctgagcctgctgcgcaatctggaaggcatcgagctgatcccgctggacgtggcc
ggcaagccgctcaatggagttaacggcacgccgatggccttcaagatgcccggcgatcgc
gtgcagccggtgggctttgccgaagaagaagcgttgatcccgtatccgctgaacaccttc
cgtggctaccgctatctgcaggaatatttcgctttccaggacaagttcctgttcgtcgac
ttgaacggcctcgacctgctcaaggcgctgcccgaagacacgctcaagcagatgcacggc
ctggagctgcgcttcgacattcgcaagagcggcatccagcgcctgcgcccgaccctggac
aacgtgaagctttactgcacgcccatcgtcaacctgttcaagcacgatgccttgccgatt
cgcctcgatggcaagcaggacgaatacctgttgctaccggccgaatacgacctggaaaac
tgcggtgtgttttcgattgaaggcgtcaccggctggaagccgggcggcctgggttatcag
gcgtacgtaccgttcgaatccttcgagcacgacccgagtttcgatgtgccgcaaagccgt
ccgcattacagcattcgccaacgcacctcgctgctgcacgacggcctcgacacttacctg
agcttcggcattcgccacaccgaagcccacgaaacgctgtcgatcgagctgatgtgcacc
aaccagaacctgccgcgccggctcaagctcggcgacatctgcatggcctgtgaagagacc
ccggagtttctcagcttccgcaacatcaccccggcgacctcaagcttcgcgccgccgctg
agccacgacttcctgtggaagctgatcagcaacatgtcgctcaactacctgtcgttggcc
aacgtcgacgcgctcaaggtgattctcgaaacctacgacctgccgcgctactacgaccag
cacgcgcagaaagtcagcaagcgcctgctgggtggactcaagtcgatccgtcaccagcac
gtcgaccgacttcaccgagggttgccgctgcgcggcttgcgcaccgaactgaccatcgac
ccacaaggctatatcggtgagggcgacctgttcgttttcgcttcggttcttaacgagttt
ttcgcgctttacgccagtctcaattcgtaccacgagctgcgggtaaaaagcacacaggga
gaggtgtaccaatggacaccacgtatgggcctgcagccgcttctttaa

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