Pseudomonas batumici: NUH87_06140
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Entry
NUH87_06140 CDS
T10437
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
pbam Pseudomonas batumici
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
TEN_YD-shell
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
WVV63698
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Position
1432362..1436420
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AA seq
1352 aa
AA seq
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MTALAGQVLLMNGNAAVGVKLKVGAQIATTDATGRFLLSGLNTGNQTLRIDGSGADKPGR
HYGFFDDLVVISQGGKTQTLPYTIWLPRTDTQHAVSLPSPTTSEVTVTTPYIPGLELHIP
QGTVIRDIDGKVVTSVSITPIPIDRTPFPLPTHDIPVYFTIQPGSANLQAIDPKSFQAAR
IIYPNYNSRPIGSAMDFWTYDPVYKGWYVYGEGIVSANGKQVIPGNGVGIYEFTGAMVSV
PSLAPAKNPTAGGGNQWPEVASSDKAEPVDTSTGLFTYPHTDLTVADTIPLTLTRTYLSE
DTRSRAFGIGTNHVYDIFMVGDTSPWTYQDLILSNGERIHFNRTSSGTGYADAVYQHNSS
PLDRFQGATISWVGGTWPWLLKLKDGSKMWFPDAEDNTTLAKAAMTQAMDRFGNTITLTR
DSGGNLQQVTSPNGHWISLTYDSSNRITQANDNMGRTVSYTYDSNGNLSTVTDANGGVET
YTYDSSHQMLTITRPNGNVLLSNSYDANGRVSQQTLGYGSPVAGTYQFAYTLSGSQVTQT
DVTDPRGNIERLVFNGAGYVTTNTYGVGLPEQQSYSVQRDTTTNMVTSVTDALGRVTGYA
HDGVGNLTSVTRLQGTSQAVTDSYTYDPTFNQLASHTDGLSHTTSYSYDSFGHLTQITDP
LGNAVKFTSDGQGRVTQITDPIGANTTLSYSLGDLASVSDPLGRTTSYLTDSAGRILAIT
DAVGRHTMMDYDPLDRKTKVTDPLGSVTSFAYDANSNLLSVTDAKSGVHAYSYDARDRRV
TYTDPLNATQSYGLDGLGNVTQWTARNGVIATYTYDALNRRTQSAFGQTLIGGGPSLTTP
DATVGYTYDGGNRLTQIVDTQGGTITRSFDNLDHLLSETTSLGTVSYAYDAADRRTSMTV
TGQPAVNYTYDVGNRLTSLGNGSQSAAFTYDANNRRATLTLPNGVVVSYGYDNAGQLINL
SYAKGGTSLGNLSYGYDNAGQRVQLGGSLASTTLPSAVSTTSYNAANQLTAWGGATLLYD
ANGNMTSDGSNTYTWDSRQRLSTLTGTTSGSFSYDAADRRSQKTIAGQTTSYVFDGINLV
QELAGAVTPTVQANLLTGGVDEVFSRTEAGGSTYSYLVDALGSTQALTDSTGASTTQYTY
DPYGQTSSSGSASANSQQYTGRENDGTGLYYYRARYYSPGFGRFISGDPIGLAGGINTYA
YANGNPIRYTDSRGLDVYVGNTSQVAGLHQKIIVDTPNGQYGQSYGMNSRTDPQQGMFEA
ANVAPAPGQAGSGIVYPDSDPTTQIQKTLHTTPEEDAVIVQYLKNQLGNTGPYNVVTNSC
RTYSNAQFDAITQLVNKMRGTPSAQLWQPDGP
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
gtgactgcactggcgggccaagtcctgttgatgaacggcaatgcggctgtgggtgtgaaa
ttgaaagtgggcgcacaaatcgctaccacggacgcgaccggccgctttttgctgagtggt
ctcaacaccggaaatcaaacgctgagaatcgatggctccggcgccgacaagccgggccgt
cactatggattttttgatgacctggtcgtgatttctcagggcggcaaaacacaaaccctg
ccatacaccatttggttgccccgtacggatacgcaacacgctgtgagcctgccctcgccg
acaaccagtgaagtgactgtcaccacaccctatatcccaggtttggaattgcacattccc
caagggacggtcattcgtgatatcgacggtaaggtggttacctccgtcagtatcacgcct
atccctattgatcggacaccattcccgctccccacacacgatatcccggtgtacttcacc
attcagccaggcagcgcgaatctacaggccattgaccccaagagctttcaggcggcacgg
atcatttatcccaattacaacagccgcccgatcggctcggcgatggacttctggacttac
gatcccgtctacaaaggctggtacgtttatggcgaagggatcgtttccgcgaacggcaaa
caggtgattccagggaacggtgtgggtatttatgagttcaccggagccatggtcagcgtg
ccctccctggcgcccgccaaaaaccccaccgccggcggcggcaatcaatggccagaggtt
gcctcgagcgacaaagccgagccggtggatacgtccacggggttgttcacctatccgcac
accgatctgaccgtcgctgacactattccactgaccttgactcgcacctacctttccgag
gatacgcggtcgcgcgccttcggcattggtaccaaccacgtgtatgacattttcatggtc
ggcgataccagcccttggacctatcaggacctgattctctcgaatggcgagcgtatccac
ttcaaccggacttcgtcaggtacgggttacgcggatgcggtgtatcaacacaacagctcc
ccattggatcgatttcagggggcaaccatctcgtgggtcggcggcacttggccgtggctg
ctcaagctaaaagatggctcgaaaatgtggttcccggacgccgaagacaacaccacgcta
gcaaaggcagccatgacccaggccatggatcgctttggtaatacgatcacactgacacga
gactccggcggcaacctgcagcaggtgacatcgcccaatgggcactggataagcctcacc
tatgactcaagcaaccgcattactcaggccaacgacaatatgggtcgtacggtcagctac
acctatgacagcaacggaaatctttcgaccgtaaccgatgccaatggcggcgtggaaacc
tatacctacgacagctcccaccagatgctgaccatcactcgacccaacggcaatgtgctg
ctcagcaacagttacgatgccaatggccgggtctcccagcaaaccctgggctatggcagc
cctgtggcgggtacctatcaattcgcctacacactcagcggcagccaagtgacccagacg
gatgtgaccgatcctcgcggcaacatcgagcgcttggtgttcaatggggcgggttacgtc
acaacaaacacctacggtgtcggtctgcccgagcagcaaagctatagcgtccaacgcgac
accaccaccaacatggtgacctccgtcaccgatgccctgggacgagtgaccggatacgca
cacgacggtgtcggcaacctcaccagcgtgacccgactgcaagggacatcgcaggccgtg
acggacagctatacctacgaccccaccttcaatcagctggccagccacaccgatggtctg
agtcacacgaccagctacagctatgacagttttggacatctgacgcagatcaccgatccc
ttgggcaatgccgtgaaattcacttccgacggccaagggcgggtgacgcagatcaccgac
cccatcggcgcgaataccactctcagctattctcttggcgatctcgccagcgtcagcgac
cctttggggcgaaccaccagctacctcaccgatagcgcggggcggatcctggcaattact
gatgccgtggggcgccacaccatgatggattatgatccgctggaccgtaaaaccaaggtg
acagacccactgggaagcgttaccagttttgcctacgacgcgaatagcaatcttctgagc
gtcactgacgccaagagcggagtgcatgcgtatagctacgatgctcgcgatcgccgcgtg
acttacaccgatccgttgaacgccacgcaaagctatggcctcgacggcctgggtaatgtg
acacagtggaccgcccgcaatggcgtcatcgccacctacacctatgatgctttgaatcgg
cgcacgcaatcggccttcggacaaaccttgattggcggtggcccctcgttgaccacaccc
gatgccaccgtgggctacacctacgatggtggtaaccgtctgacgcagatcgtggacact
caaggtggcacgattactcgcagctttgacaatctggatcacctgctcagcgagacgacc
tccctgggcaccgtctcctacgcttacgatgcagctgatcgtcgcaccagcatgacggtg
acggggcagcccgccgtgaattacacctacgacgtcggcaatcgcctgacgagtctcggt
aacgggagccagagtgcggccttcacctatgatgcgaacaaccgtcgtgccaccttgacc
ctgcccaacggggtcgtcgtcagctacggttacgataacgccggccaactgatcaacctc
agttacgccaagggcggtaccagcctgggcaatttgagctatggctatgacaacgctggc
cagcgagtgcagcttggcggcagcctggctagcaccaccctccccagcgccgtgagcact
accagctacaacgccgctaaccaactgacggcatggggtggcgccaccttgctgtatgac
gccaacggcaatatgaccagcgacggcagcaacacctacacctgggattcgcgtcagcgc
ctgagcacactcacgggcaccacgtccggcagcttcagttatgacgcggccgacagacgc
agccagaagacgattgccgggcagaccaccagctatgtcttcgacggtatcaacctggtg
caagagctggccggtgccgtcacccccaccgtacaggccaacctcctcacaggtggcgtc
gatgaagtcttcagccgcaccgaggccggtggcagcacctacagctacctggttgatgca
ctgggttcaacccaagcactcaccgacagcaccggagcgtccaccacgcaatacacctat
gacccttacggccagaccagcagcagcggctccgccagcgctaacagccagcagtacacc
gggcgggaaaatgatggcacgggcctctattattatcgggcacggtattactctccgggc
tttggccggtttatctcgggagatccgattggtcttgcgggagggattaatacgtatgcc
tatgcgaatggaaatcctattcggtacaccgactcgagaggtttggatgtttatgtcggc
aacacaagtcaggtagcgggcctccatcaaaaaattattgtggatacacctaacgggcag
tatggtcaaagttatgggatgaacagtcgcaccgacccgcaacaagggatgttcgaggca
gccaacgttgcgccagcgcccgggcaagctggtagtggtattgtatatccggatagcgat
ccgacaacacaaatccagaaaaccttgcacaccactccagaggaagatgccgttattgtg
cagtatcttaagaaccagcttggcaatactgggccatacaatgtagtgacgaatagctgc
cgaacatattcaaatgctcagtttgatgccattacacaacttgtcaataaaatgcgaggg
actccttccgcacaactttggcagcctgacggtccttga
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