Pseudomonas batumici: NUH87_07480
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Entry
NUH87_07480 CDS
T10437
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pbam Pseudomonas batumici
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbam03400
]
NUH87_07480
DNA repair and recombination proteins [BR:
pbam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NUH87_07480
Archaeal homologous recombinant proteins
NUH87_07480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
ABC_tran
AAA_15
nSTAND3
MMR_HSR1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WVV63946
LinkDB
All DBs
Position
1693969..1697610
Genome browser
AA seq
1213 aa
AA seq
DB search
MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAVPR
LNNASRDAKVPDAEGEIGTGDPRTLLRRGTGAGFAEVDFVGIDGRRYRARWEANRARDKA
GGKLQASRQSLRDLDSDQLLASQKGEYKTLLESRLGLNFEQFTRAVLLAQSEFSAFLKAD
DNERSELLEKLTDTALYTRLGRRAFDKTKQAREAQKLLLDQAGGVAPMEAEARVELDRQF
TEAQQQLKTRQAQLRQLELQHTWLKELLQWQAQHQAAVEQLQDAEQDWQARDAERQQLAR
LEQLAPQRHQFARQRQLNEQLAPLAEQIQQHIDQQADLQARQQQLEQSRSDAHARLNEAL
ARQSDSAPLLRQAFDEQATLTHLGKDLGDSQRLQQAAEQASAEGRLQLGSLLDQQQQVAT
RLERIAEQLQHSTALAPLSDAWHAYRDRLQQLMLIGNRLNQGQRELAQLQARVAQTDQQL
TEQRGALEILYSEAGAEPAAVGEQIQILGSLLQDNRKQLRAFEELQRLWSRQRELDQRTQ
QLQERQHGAQQQRDALNREGLQARDELKVAEQTLTITRQLLERQRLARSASVEELRGQLQ
DDQPCPVCGSHEHPYHQPEALLQSLGRHDESEEAAARQVVESLTEKLNQLREKVGGLIAQ
QKELLAQQEQLTQQHLELAPSLEAHPLHSALLEQDAGRREAWLNQQLNQLQQNIGQDEQR
QTALLTLQQEAARLQQQLHTAIEASQAAHQQLLDQQRQMGTDQERLEQELDTFASLLPSE
TLQGLRNDPAPTFMQLDQQVAQRLGQLEQQREEQQEQRERQDRIEPEQVRQQTREQQCAE
LKQRCAVLLEQQQASQHKLVGLIGQHASVEAWQQQMDQAVEQARQADASANQQLQALDSQ
LIQLGADLKARQERRQVLEQESLELARQVADWRALHPELDDAGLEQLLACDDEHLSQLRQ
QLQRSEKAVEQARVLLQEREKHLRHHQAQHNGNLDAPALDAALADLQTQLGASEQHCAEL
RAQQTEDQRRQDANQELQQRIADANREYQRWARLDALIGSATGDRFRKLAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVMDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLKIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSTLEVT
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctggccatccgcctgaaaaacctggcctcgctcgccggccccttcgagctg
gatttcaccgccgaacccttggccagtgccggtctgttcgccatcaccggccccaccggc
gcgggtaaaagcaccctgctcgatgccctgtgcctggcgctgttcggcgccgtacccagg
ctgaacaacgcctcgcgcgatgccaaggtgccggacgccgaaggcgaaatcggtaccggc
gacccgcgcaccctgctacgccgtggcaccggcgccggctttgccgaagtggatttcgtt
ggcatcgacggccgccgctaccgcgcccgctgggaagccaaccgtgcccgggacaaggcc
ggcggcaagttgcaggccagccgccagagcctgcgcgacctcgacagcgatcaactgctg
gccagccagaaaggcgaatacaagaccctgctggaaagccgcctgggcctgaacttcgaa
cagttcacccgcgcggtgctgctggcccagagcgagttcagcgcctttctcaaggccgac
gacaacgagcgcagcgaactgctggaaaagctcaccgacaccgccctctacacccgcctc
ggtcgtcgcgccttcgacaagaccaagcaggcccgcgaagcccagaagctgttgctggac
caggccggtggcgtcgcgcccatggaggctgaagcacgggtcgagctggatcggcaattc
accgaagcccagcagcaactcaagacccgacaagcccagctcaggcagctggagctgcaa
cacacctggctcaaggagttgctgcaatggcaggcccaacaccaggctgccgtcgaacaa
ctgcaagacgccgaacaggactggcaagcccgcgatgccgagcgccagcagttggctcgc
ctggaacaactggcgccgcagcggcatcagttcgcccgtcagcgccagttgaacgaacaa
ctggcgccactggccgaacagatccagcagcatatcgaccagcaggccgacttgcaggcc
cgtcagcaacagcttgaacaaagccggtcggatgcccacgcccgcttgaacgaggccctg
gcccggcaaagcgacagcgcgccgctgctgcgccaagccttcgatgaacaggccacactg
acccacctgggcaaggacctgggcgacagtcagcgcctgcaacaggccgccgaacaggcc
agcgcagaaggccgtttgcagctcggcagcctgctcgatcagcaacagcaggtcgccacg
cgcctggagcgaatcgccgagcagttgcagcacagtaccgccctcgcccccttgagcgat
gcctggcacgcctatcgcgatcgcttgcaacagctgatgctgatcggcaatcgactgaac
cagggccagcgcgagctggcacagctgcaagcacgggtcgcgcaaaccgaccagcaactg
accgagcagcgtggcgccctcgaaatactgtacagcgaagccggggcggaaccggccgct
gtcggcgaacagatccagattctcggcagtctgctgcaggacaaccgcaagcaactgcgc
gcgttcgaagaactgcaacggctgtggagccgccagcgcgagctggaccaacgcacgcag
cagttgcaggagcgacaacacggcgcccagcagcaacgcgacgcactcaaccgcgaaggc
ctgcaggcacgggacgaactcaaggtcgccgagcagaccctgacgattacccggcagttg
ctcgaacgccagcgcctggcccgcagcgccagcgtcgaagagctgcgcgggcagttgcag
gacgaccagccctgcccggtgtgtggcagccatgagcatccctaccaccaacccgaggcc
ctgttgcagagcctgggtcgccacgacgagagcgaagaagccgcggcgcgtcaggtcgtc
gaatcgctgacggagaaactcaaccagcttcgggaaaaggtcggcgggctgatcgcccag
cagaaagaactgctcgcccagcaggagcagttgacccagcagcacctggaactggcaccg
agcctggaagcccatccgctgcacagcgcgctgctggagcaggatgccggccgacgcgag
gcctggctcaaccagcaattgaaccaactgcagcagaacatcggccaggacgagcaacgg
caaaccgccctgctcaccctgcaacaggaggccgcgcggctccagcagcaactgcacacg
gccatcgaggccagtcaggccgcgcaccagcagttacttgatcagcaacgccagatgggc
acggatcaagagcgcctggaacaggaactggacaccttcgccagcctgttgccaagcgaa
accctgcaaggcctgcgcaatgatccggcgccgaccttcatgcagctcgatcagcaggta
gcacaacgtctcggccagttggaacagcagcgcgaggagcaacaggaacaacgcgagcgc
caggacaggatcgaaccggaacaggtccgccagcagacccgcgagcagcaatgcgcggaa
ctgaaacaacgttgcgccgtactcctcgagcagcaacaagccagccagcacaaactggtc
ggcttgattggccaacacgccagcgtcgaagcctggcagcagcagatggatcaggcggtg
gaacaggcgcggcaggccgatgcgtcggccaaccagcagttgcaggccctcgacagccaa
ctgatccagctcggcgccgacctcaaggcccgccaggagcgccggcaggtcctggaacag
gaaagcctggaactggcgcggcaggtcgcggactggcgagcccttcacccggaactggat
gacgccggcctggagcaactgctggcctgcgacgatgaacacctcagccagttgcgccag
caactgcagcgcagcgaaaaagccgtcgagcaagcccgggtgttgttgcaggagcgggag
aaacaccttcggcaccatcaggcccaacacaatggcaacctcgacgcgccggcgctggac
gccgccctggccgacctgcagacccagttgggggccagtgaacagcactgtgccgagctg
cgtgcgcaacagaccgaagaccagcgacgccaggacgccaaccaggaactgcagcaacgg
atcgccgacgccaaccgcgaatatcagcgctgggcacgtctggacgcgctgatcggctcg
gccaccggcgaccgcttccgcaagttggcccaggcctacaacctcgacctgctggtgcat
catgccaacgcgcagttgcgccaactggtacgacgctatcgcctcaagcgcggcggcagc
atgctcgggttgttggtgatggacaccgagatgggcgacgaactgcgttcggtgcattcg
ctgtccggcggcgaaacctttctggtctcgctggccctggcgttgggcctggcatcgatg
gcctcgagcacgctgaagatcgaatcgctgtttatcgacgaaggcttcggcagccttgac
cccgaatccctgcaactggcgatggatgcgctggacggcctgcaagcccagggccgcaag
gtcgcggtgatttcccacgtacaggagatgcacgagcggataccggtgcagatccaggta
cgccgtcagggcaacgggctgagcaccctggaggtgacatga
DBGET
integrated database retrieval system
