Pseudomonas batumici: NUH87_07640
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Entry
NUH87_07640 CDS
T10437
Symbol
tssA
Name
(GenBank) type VI secretion system protein TssA
KO
K11902
type VI secretion system protein ImpA
Organism
pbam Pseudomonas batumici
Pathway
pbam02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pbam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
NUH87_07640 (tssA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pbam02044
]
NUH87_07640 (tssA)
Secretion system [BR:
pbam02044
]
Type VI secretion system
Imp/Vas secretion system core components
NUH87_07640 (tssA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ImpA_N
Motif
Other DBs
NCBI-ProteinID:
WVV63977
LinkDB
All DBs
Position
complement(1733851..1734867)
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AA seq
338 aa
AA seq
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MSIKELIPYIDSLYDRPCGPNLEYRADFIQLLQEIDGGNEVQYGDHLYPATPVDWKRVRS
LCLTLLEDSLDLRVAVCLARALLELQGLSGFVEGLRLIDCLLRERWEDVHPQLLAEEGHD
PLVRLNTLAELAVPTSVVLVLKRQSLGSAVGLEPLCVADLACIAESAQEEARTQGLARLA
GLIESPARAELIEGLRTLRSLVELIAQIGVCLEEKTAAPGISPLGGLGRALDKWCRVAEE
RCSAVLPPTAADSPPAATASAATAGAAAWSGVCQSREDVVRALDAICAYYAHHEPSSPVP
LLAARTRRLATMSFLEAIAELVPGSLADLHALGGIAND
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcgataaaagaactgattccttatattgatagcctgtatgaccgaccctgtggtcca
aacttggaataccgggctgacttcattcaactgttgcaagaaatagacggcggcaacgaa
gttcaatacggcgaccatttatatcccgccacaccggtggactggaaacgggtacggtcg
ctgtgcctgacgctgctggaagattccctcgacctgcgggttgcagtctgcctggcgcgt
gccttgctggagttgcaggggctgtccggctttgtcgaaggacttcggctgatcgactgc
ctgctgcgcgagcgttgggaggatgttcacccacagctcctggccgaggaagggcacgat
ccgttggtgcgcctcaatacgctggccgagctggcggtgcccaccagcgtggtcctggtg
ctcaagcgccagtccctggggagcgccgtgggccttgagccgctgtgcgtggccgatctg
gcatgcatcgccgagtccgctcaggaggaagcccggacgcaagggctggcgcgcttggcg
ggcctgatcgaatctcccgcccgcgccgagttgatcgaggggcttcgcacactcaggagc
ctggtggagctgatcgcgcagatcggtgtttgcctcgaggaaaaaaccgcagcgcccggt
atttccccgttgggcggactcgggcgcgctctggacaagtggtgtcgcgtcgctgaggag
cgttgcagcgccgtcttgccgccgactgccgccgactcgccgccggcagccaccgccagt
gcggcaacggccggcgcggccgcctggagcggcgtctgccagtcgcgtgaagacgtggtc
cgtgccctggatgccatttgcgcctactacgcccaccacgagccttcgagtccggtgccc
ctgctggcggccaggacgcgccggctcgccaccatgagttttctcgaagcgatcgccgaa
ctggtgccgggcagtctcgccgacctgcacgccctgggcggtatcgccaatgactaa
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